ENSDARG00000019063


Danio rerio

Features
Gene ID: ENSDARG00000019063
  
Biological name :fat1b
  
Synonyms : fat1b / FAT atypical cadherin 1b
  
Possible biological names infered from orthology : FAT1 / FAT atypical cadherin 1 / Q14517
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 30156449
Gene end: 30226882
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000014827
Ensembl peptide - ENSDARP00000142312
Ensembl peptide - ENSDARP00000139028
NCBI entrez gene - 565591     See in Manteia.
RefSeq - XM_009291165
swissprot - E7F8B9
swissprot - A0A140LGD3
swissprot - A0A0G2L2R0
ZFIN ID - ZDB-GENE-130530-563
Ensembl - ENSDARG00000019063
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FAT1ENSGALG00000013579Gallus gallus
 FAT1ENSG00000083857Homo sapiens
 Fat1ENSMUSG00000070047Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fat1a / FAT atypical cadherin 1a / FAT1* / Q14517* / FAT atypical cadherin 1*ENSDARG0000001759157
fat3a / FAT atypical cadherin 3a / FAT3* / Q8TDW7* / FAT atypical cadherin 3*ENSDARG0000003384043
FAT3 (1 of many) / si:ch211-214k5.6 / FAT3* / Q8TDW7* / FAT atypical cadherin 3*ENSDARG0000008770941
fat2 / FAT atypical cadherin 2 / Q5F226* / Q9NYQ8* / Protocadherin Fat 2 *ENSDARG0000001892338
FAT4 / FAT atypical cadherin 4 / Q2PZL6* / Q6V0I7* / Protocadherin Fat 4 *ENSDARG0000010528520
dchs1b / dachsous cadherin-related 1b / DCHS1* / Q96JQ0* / E9PVD3* / Protocadherin-16 * / dachsous cadherin-related 1*ENSDARG0000007985019
dchs1a / dachsous cadherin-related 1a / DCHS1* / Q96JQ0* / E9PVD3* / Protocadherin-16 * / dachsous cadherin-related 1*ENSDARG0000007002519
cdh23 / cadherin-related 23 / Q9H251*ENSDARG0000000756117
si:dkey-22o22.2ENSDARG0000010244514
si:ch211-186j3.6ENSDARG0000007808814
celsr1a / cadherin EGF LAG seven-pass G-type receptor 1a / CELSR1* / O35161* / Q9NYQ6* / cadherin EGF LAG seven-pass G-type receptor 1*ENSDARG0000006918512
celsr1b / cadherin EGF LAG seven-pass G-type receptor 1b / CELSR1* / O35161* / Q9NYQ6* / cadherin EGF LAG seven-pass G-type receptor 1*ENSDARG0000005825912
celsr2 / cadherin, EGF LAG seven-pass G-type receptor 2 / Q9HCU4* / cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 *ENSDARG0000001972611
celsr3 / cadherin, EGF LAG seven-pass G-type receptor 3 / Q91ZI0* / Q9NYQ7*ENSDARG0000005582510
si:dkey-1m11.6ENSDARG000000978698
cdh23 / cadherin-related 23 / Q99PF4* / Q9H251* / Cadherin-23 *ENSDARG000000944543


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001791  Laminin G domain
 IPR001881  EGF-like calcium-binding domain
 IPR002126  Cadherin
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015919  Cadherin-like
 IPR018097  EGF-like calcium-binding, conserved site
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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