ENSDARG00000055825


Danio rerio

Features
Gene ID: ENSDARG00000055825
  
Biological name :celsr3
  
Synonyms : cadherin, EGF LAG seven-pass G-type receptor 3 / celsr3
  
Possible biological names infered from orthology : Q91ZI0 / Q9NYQ7
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 26125218
Gene end: 26212523
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116971
Ensembl peptide - ENSDARP00000072796
Ensembl peptide - ENSDARP00000116066
Ensembl peptide - ENSDARP00000116287
swissprot - A9C3S7
swissprot - F1R379
swissprot - F1R6D5
swissprot - F1R8J2
ZFIN ID - ZDB-GENE-070122-3
Ensembl - ENSDARG00000055825
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CELSR3ENSGALG00000036763Gallus gallus
 CELSR3ENSG00000008300Homo sapiens
 Celsr3ENSMUSG00000023473Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
celsr2 / cadherin, EGF LAG seven-pass G-type receptor 2 / Q9HCU4* / cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 *ENSDARG0000001972659
celsr1a / cadherin EGF LAG seven-pass G-type receptor 1a / CELSR1* / O35161* / Q9NYQ6* / cadherin EGF LAG seven-pass G-type receptor 1*ENSDARG0000006918558
celsr1b / cadherin EGF LAG seven-pass G-type receptor 1b / CELSR1* / O35161* / Q9NYQ6* / cadherin EGF LAG seven-pass G-type receptor 1*ENSDARG0000005825958
fat3a / FAT atypical cadherin 3a / FAT3* / Q8TDW7* / FAT atypical cadherin 3*ENSDARG0000003384022
fat1a / FAT atypical cadherin 1a / FAT1* / Q14517* / FAT atypical cadherin 1*ENSDARG0000001759122
FAT3 (1 of many) / si:ch211-214k5.6 / FAT3* / Q8TDW7* / FAT atypical cadherin 3*ENSDARG0000008770921
fat1b / FAT atypical cadherin 1b / FAT1* / Q14517* / FAT atypical cadherin 1*ENSDARG0000001906321
fat2 / FAT atypical cadherin 2 / Q5F226* / Q9NYQ8* / Protocadherin Fat 2 *ENSDARG0000001892320
dchs1b / dachsous cadherin-related 1b / DCHS1* / Q96JQ0* / E9PVD3* / Protocadherin-16 * / dachsous cadherin-related 1*ENSDARG0000007985020
dchs1a / dachsous cadherin-related 1a / DCHS1* / Q96JQ0* / E9PVD3* / Protocadherin-16 * / dachsous cadherin-related 1*ENSDARG0000007002519
FAT4 / FAT atypical cadherin 4 / Q2PZL6* / Q6V0I7* / Protocadherin Fat 4 *ENSDARG0000010528518
si:dkey-22o22.2ENSDARG0000010244515
si:ch211-186j3.6ENSDARG0000007808815
cdh23 / cadherin-related 23 / Q9H251*ENSDARG0000000756115
si:dkey-1m11.6ENSDARG0000009786913
cdh23 / cadherin-related 23 / Q99PF4* / Q9H251* / Cadherin-23 *ENSDARG000000944543


Protein motifs (from Interpro)
Interpro ID Name
 IPR000203  GPS motif
 IPR000742  EGF-like domain
 IPR000832  GPCR, family 2, secretin-like
 IPR001791  Laminin G domain
 IPR001879  GPCR, family 2, extracellular hormone receptor domain
 IPR001881  EGF-like calcium-binding domain
 IPR002049  Laminin EGF domain
 IPR002126  Cadherin
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015919  Cadherin-like
 IPR017981  GPCR, family 2-like
 IPR020894  Cadherin conserved site
 IPR032471  GAIN domain, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007166 cell surface receptor signaling pathway IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007214 gamma-aminobutyric acid signaling pathway IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000076 swim bladder swim bladder hypoplastic , abnormal
Show

 ZFA:0000107 eye eye movement quality , abnormal
Show

 ZFA:0001094 whole organism whole organism viability , abnormal
Show

 ZFA:0009319 ON-bipolar cell ON-bipolar cell functionality , abnormal
ON-bipolar cell axon terminus morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr