ENSDARG00000036308


Danio rerio

Features
Gene ID: ENSDARG00000036308
  
Biological name :nod1
  
Synonyms : nod1 / nucleotide-binding oligomerization domain containing 1
  
Possible biological names infered from orthology : Nucleotide-binding oligomerization domain-containing protein 1 / Q8BHB0 / Q9Y239
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 53710416
Gene end: 53734405
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129412
swissprot - X1WGQ4
ZFIN ID - ZDB-GENE-071116-9
Ensembl - ENSDARG00000036308
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NOD1ENSGALG00000036807Gallus gallus
 NOD1ENSG00000106100Homo sapiens
 Nod1ENSMUSG00000038058Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nod2 / nucleotide-binding oligomerization domain containing 2 / Q8K3Z0* / Q9HC29* / Nucleotide-binding oligomerization domain-containing protein 2 *ENSDARG0000001075628
si:dkey-23k10.2ENSDARG0000009770017
si:ch211-250k18.7ENSDARG0000009376117
si:ch73-168d20.1ENSDARG0000003990017
si:ch73-286h23.4ENSDARG0000009019317
si:ch211-250k18.5ENSDARG0000006874917
si:ch211-213a13.2ENSDARG0000009302417
si:ch211-149a19.3ENSDARG0000007945616
si:dkey-3h2.3 / si:dkeyp-4f2.1ENSDARG0000010261616
si:dkey-13n15.11ENSDARG0000007800216
si:dkey-269p2.1ENSDARG0000009527516
si:ch211-218h8.1ENSDARG0000009102616
si:ch211-201o1.1ENSDARG0000008868916
nlrc8 / NLR family CARD domain containing 8ENSDARG0000007681916
si:ch211-276i6.1ENSDARG0000011343116
si:dkey-240n22.6ENSDARG0000008929616
nlrp16 / NACHT, LRR and PYD domains-containing protein 16ENSDARG0000007767316
si:dkey-27n6.4ENSDARG0000010175716
si:dkey-121n8.7ENSDARG0000009406716
si:ch211-213a13.5ENSDARG0000007161816


Protein motifs (from Interpro)
Interpro ID Name
 IPR001315  CARD domain
 IPR001611  Leucine-rich repeat
 IPR007111  NACHT nucleoside triphosphatase
 IPR011029  Death-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042742 defense response to bacterium IMP
 biological_processGO:0042981 regulation of apoptotic process IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0050700 CARD domain binding ISS


Pathways (from Reactome)
Pathway description
NOD1/2 Signaling Pathway
TAK1 activates NFkB by phosphorylation and activation of IKKs complex
activated TAK1 mediates p38 MAPK activation
JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1
Ovarian tumor domain proteases
Interleukin-1 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000094 blood island blood island neutrophil decreased amount , abnormal
Show

 ZFA:0001094 whole organism whole organism viability , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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