ENSDARG00000039652


Danio rerio

Features
Gene ID: ENSDARG00000039652
  
Biological name :si:dkey-235d18.5
  
Synonyms : si:dkey-235d18.5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 52584532
Gene end: 52725696
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120737
Ensembl peptide - ENSDARP00000146468
swissprot - F1QKZ9
ZFIN ID - ZDB-GENE-041014-243
Ensembl - ENSDARG00000039652
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037711Gallus gallus
 ENSGALG00000005120Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fbn2a / fibrillin 2a / FBN1* / FBN2* / Q61555* / P35555* / P35556* / Q61554* / fibrillin 1* / fibrillin 2* / Fibrillin-1 Asprosin* / Fibrillin-2 Fibrillin-2 C-terminal peptide*ENSDARG0000005189634
fbn2b / fibrillin 2bENSDARG0000009823734
si:dkey-30j22.1ENSDARG0000004282930
si:ch73-105b23.1ENSDARG0000008755827
BX663503.3 / LTBP4* / Q8K4G1* / Q8N2S1* / latent transforming growth factor beta binding protein 4*ENSDARG0000009913724
ltbp1 / latent transforming growth factor beta binding protein 1 / Q14766* / Q8CG19*ENSDARG0000005692220
FP102018.1 / Danio rerio latent transforming growth factor beta binding protein 3 (ltbp3), mRNA. / LTBP3* / Q9NS15* / latent transforming growth factor beta binding protein 3*ENSDARG0000003568218
fbln2 / fibulin 2 / P37889* / P98095*ENSDARG0000001515617
FBLN1 / fibulin 1 / P23142*ENSDARG0000010331114
fbln5 / fibulin 5 / Q9UBX5* / Q9WVH9*ENSDARG0000003927311
efemp2a / EGF containing fibulin extracellular matrix protein 2a / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG0000009432410
efemp2b / EGF containing fibulin extracellular matrix protein 2b / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG000000208119
si:ch73-173h19.3 / EFEMP1* / Q12805* / Q8BPB5* / EGF containing fibulin extracellular matrix protein 1* / EGF-containing fibulin-like extracellular matrix protein 1 *ENSDARG000001042107
CU570800.1 / EFEMP1* / Q12805* / EGF containing fibulin extracellular matrix protein 1*ENSDARG000000591215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR026823  Complement Clr-like EGF domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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