ENSDARG00000087558


Danio rerio

Features
Gene ID: ENSDARG00000087558
  
Biological name :si:ch73-105b23.1
  
Synonyms : si:ch73-105b23.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 8825192
Gene end: 8829392
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000108281
swissprot - F1QW35
ZFIN ID - ZDB-GENE-081107-41
Ensembl - ENSDARG00000087558
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-30j22.1ENSDARG0000004282939
fbn2b / fibrillin 2bENSDARG0000009823738
fbn2a / fibrillin 2a / FBN1* / FBN2* / Q61555* / P35555* / P35556* / Q61554* / fibrillin 1* / fibrillin 2* / Fibrillin-1 Asprosin* / Fibrillin-2 Fibrillin-2 C-terminal peptide*ENSDARG0000005189637
BX663503.3 / LTBP4* / Q8K4G1* / Q8N2S1* / latent transforming growth factor beta binding protein 4*ENSDARG0000009913721
ltbp1 / latent transforming growth factor beta binding protein 1 / Q14766* / Q8CG19*ENSDARG0000005692217
FP102018.1 / Danio rerio latent transforming growth factor beta binding protein 3 (ltbp3), mRNA. / LTBP3* / Q9NS15* / latent transforming growth factor beta binding protein 3*ENSDARG0000003568216
si:dkey-235d18.5ENSDARG0000003965216
fbln2 / fibulin 2 / P37889* / P98095*ENSDARG0000001515614
FBLN1 / fibulin 1 / P23142*ENSDARG0000010331111
fbln5 / fibulin 5 / Q9UBX5* / Q9WVH9*ENSDARG000000392737
efemp2a / EGF containing fibulin extracellular matrix protein 2a / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG000000943247
efemp2b / EGF containing fibulin extracellular matrix protein 2b / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG000000208117
si:ch73-173h19.3 / EFEMP1* / Q12805* / Q8BPB5* / EGF containing fibulin extracellular matrix protein 1* / EGF-containing fibulin-like extracellular matrix protein 1 *ENSDARG000001042105
CU570800.1 / EFEMP1* / Q12805* / EGF containing fibulin extracellular matrix protein 1*ENSDARG000000591214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR024731  EGF domain
 IPR026823  Complement Clr-like EGF domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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