ENSDARG00000020811


Danio rerio

Features
Gene ID: ENSDARG00000020811
  
Biological name :efemp2b
  
Synonyms : efemp2b / EGF containing fibulin extracellular matrix protein 2b
  
Possible biological names infered from orthology : EFEMP2 / EGF containing fibulin extracellular matrix protein 2 / EGF-containing fibulin-like extracellular matrix protein 2 / O95967 / Q9WVJ9
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 25588436
Gene end: 25604609
  
Corresponding Affymetrix probe sets: Dr.4543.1.S1_at (Zebrafish Array)   Dr.4543.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000042577
Ensembl peptide - ENSDARP00000116946
Ensembl peptide - ENSDARP00000122661
NCBI entrez gene - 405787     See in Manteia.
NCBI entrez gene - 572703     See in Manteia.
swissprot - E9QG60
swissprot - Q5WQV6
ZFIN ID - ZDB-GENE-030219-125
Ensembl - ENSDARG00000020811
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EFEMP2ENSG00000172638Homo sapiens
 Efemp2ENSMUSG00000024909Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
efemp2a / EGF containing fibulin extracellular matrix protein 2a / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG0000009432474
fbln5 / fibulin 5 / Q9UBX5* / Q9WVH9*ENSDARG0000003927347
si:ch73-173h19.3 / EFEMP1* / Q12805* / Q8BPB5* / EGF containing fibulin extracellular matrix protein 1* / EGF-containing fibulin-like extracellular matrix protein 1 *ENSDARG0000010421040
CU570800.1 / EFEMP1* / Q12805* / EGF containing fibulin extracellular matrix protein 1*ENSDARG0000005912133
fbln2 / fibulin 2 / P37889* / P98095*ENSDARG0000001515633
FBLN1 / fibulin 1 / P23142*ENSDARG0000010331131
fbn2b / fibrillin 2bENSDARG0000009823727
fbn2a / fibrillin 2a / FBN1* / FBN2* / Q61555* / P35555* / P35556* / Q61554* / fibrillin 1* / fibrillin 2* / Fibrillin-1 Asprosin* / Fibrillin-2 Fibrillin-2 C-terminal peptide*ENSDARG0000005189626
BX663503.3 / LTBP4* / Q8K4G1* / Q8N2S1* / latent transforming growth factor beta binding protein 4*ENSDARG0000009913724
si:dkey-30j22.1ENSDARG0000004282923
ltbp1 / latent transforming growth factor beta binding protein 1 / Q14766* / Q8CG19*ENSDARG0000005692223
si:ch73-105b23.1ENSDARG0000008755820
FP102018.1 / Danio rerio latent transforming growth factor beta binding protein 3 (ltbp3), mRNA. / LTBP3* / Q9NS15* / latent transforming growth factor beta binding protein 3*ENSDARG0000003568220
si:dkey-235d18.5ENSDARG0000003965216


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR026823  Complement Clr-like EGF domain
 IPR026824  EGF-containing fibulin-like extracellular matrix protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048251 elastic fiber assembly IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Molecules associated with elastic fibres


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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