ENSDARG00000104210


Danio rerio

Features
Gene ID: ENSDARG00000104210
  
Biological name :si:ch73-173h19.3
  
Synonyms : si:ch73-173h19.3
  
Possible biological names infered from orthology : EFEMP1 / EGF containing fibulin extracellular matrix protein 1 / EGF-containing fibulin-like extracellular matrix protein 1 / Q12805 / Q8BPB5
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 35068046
Gene end: 35083781
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134804
Ensembl peptide - ENSDARP00000136565
NCBI entrez gene - 563864     See in Manteia.
RefSeq - NM_001110521
RefSeq Peptide - NP_001103991
swissprot - A0A0R4IQ73
swissprot - A0A0R4IL08
ZFIN ID - ZDB-GENE-081104-245
Ensembl - ENSDARG00000104210
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EFEMP1ENSGALG00000037901Gallus gallus
 EFEMP1ENSG00000115380Homo sapiens
 Efemp1ENSMUSG00000020467Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
efemp2a / EGF containing fibulin extracellular matrix protein 2a / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG0000009432449
efemp2b / EGF containing fibulin extracellular matrix protein 2b / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG0000002081145
CU570800.1 / EFEMP1* / Q12805* / EGF containing fibulin extracellular matrix protein 1*ENSDARG0000005912142
fbln5 / fibulin 5 / Q9UBX5* / Q9WVH9*ENSDARG0000003927338
fbln2 / fibulin 2 / P37889* / P98095*ENSDARG0000001515629
FBLN1 / fibulin 1 / P23142*ENSDARG0000010331125
fbn2b / fibrillin 2bENSDARG0000009823723
fbn2a / fibrillin 2a / FBN1* / FBN2* / Q61555* / P35555* / P35556* / Q61554* / fibrillin 1* / fibrillin 2* / Fibrillin-1 Asprosin* / Fibrillin-2 Fibrillin-2 C-terminal peptide*ENSDARG0000005189623
ltbp1 / latent transforming growth factor beta binding protein 1 / Q14766* / Q8CG19*ENSDARG0000005692221
BX663503.3 / LTBP4* / Q8K4G1* / Q8N2S1* / latent transforming growth factor beta binding protein 4*ENSDARG0000009913720
si:dkey-30j22.1ENSDARG0000004282920
si:ch73-105b23.1ENSDARG0000008755818
FP102018.1 / Danio rerio latent transforming growth factor beta binding protein 3 (ltbp3), mRNA. / LTBP3* / Q9NS15* / latent transforming growth factor beta binding protein 3*ENSDARG0000003568214
si:dkey-235d18.5ENSDARG0000003965214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR026823  Complement Clr-like EGF domain
 IPR032973  EGF-containing fibulin-like extracellular matrix protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007173 epidermal growth factor receptor signaling pathway IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0005006 epidermal growth factor-activated receptor activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Molecules associated with elastic fibres


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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