ENSDARG00000056922


Danio rerio

Features
Gene ID: ENSDARG00000056922
  
Biological name :ltbp1
  
Synonyms : latent transforming growth factor beta binding protein 1 / ltbp1
  
Possible biological names infered from orthology : Q14766 / Q8CG19
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 22956427
Gene end: 23116523
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073916
Ensembl peptide - ENSDARP00000127651
NCBI entrez gene - 562072     See in Manteia.
RefSeq - XM_021474363
swissprot - F1QQ56
swissprot - X1WBQ9
ZFIN ID - ZDB-GENE-091202-8
Ensembl - ENSDARG00000056922
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LTBP1ENSGALG00000010448Gallus gallus
 LTBP1ENSG00000049323Homo sapiens
 Ltbp1ENSMUSG00000001870Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BX663503.3 / LTBP4* / Q8K4G1* / Q8N2S1* / latent transforming growth factor beta binding protein 4*ENSDARG0000009913732
FP102018.1 / Danio rerio latent transforming growth factor beta binding protein 3 (ltbp3), mRNA. / LTBP3* / Q9NS15* / latent transforming growth factor beta binding protein 3*ENSDARG0000003568230
fbn2b / fibrillin 2bENSDARG0000009823727
fbn2a / fibrillin 2a / FBN1* / FBN2* / Q61555* / P35555* / P35556* / Q61554* / fibrillin 1* / fibrillin 2* / Fibrillin-1 Asprosin* / Fibrillin-2 Fibrillin-2 C-terminal peptide*ENSDARG0000005189626
si:dkey-30j22.1ENSDARG0000004282925
si:ch73-105b23.1ENSDARG0000008755816
fbln2 / fibulin 2 / P37889* / P98095*ENSDARG0000001515615
FBLN1 / fibulin 1 / P23142*ENSDARG0000010331112
si:dkey-235d18.5ENSDARG0000003965211
fbln5 / fibulin 5 / Q9UBX5* / Q9WVH9*ENSDARG000000392738
efemp2a / EGF containing fibulin extracellular matrix protein 2a / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG000000943247
efemp2b / EGF containing fibulin extracellular matrix protein 2b / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG000000208117
si:ch73-173h19.3 / EFEMP1* / Q12805* / Q8BPB5* / EGF containing fibulin extracellular matrix protein 1* / EGF-containing fibulin-like extracellular matrix protein 1 *ENSDARG000001042106
CU570800.1 / EFEMP1* / Q12805* / EGF containing fibulin extracellular matrix protein 1*ENSDARG000000591215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR017878  TB domain
 IPR018097  EGF-like calcium-binding, conserved site
 IPR026823  Complement Clr-like EGF domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Molecules associated with elastic fibres
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000019367 tgfb3 / transforming growth factor, beta 3 / P10600*  / reaction / complex
 ENSDARG00000034895 tgfb1b / transforming growth factor, beta 1b / TGFB1* / P04202* / P01137* / transforming growth factor beta 1*  / reaction / complex






 

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