ENSDARG00000039273


Danio rerio

Features
Gene ID: ENSDARG00000039273
  
Biological name :fbln5
  
Synonyms : fbln5 / fibulin 5
  
Possible biological names infered from orthology : Q9UBX5 / Q9WVH9
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 33155428
Gene end: 33170733
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000057381
NCBI entrez gene - 449806     See in Manteia.
RefSeq - NM_001005979
RefSeq - XM_005156821
RefSeq Peptide - NP_001005979
swissprot - B8A4X3
ZFIN ID - ZDB-GENE-041010-54
Ensembl - ENSDARG00000039273
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FBLN5ENSGALG00000010747Gallus gallus
 FBLN5ENSG00000140092Homo sapiens
 Fbln5ENSMUSG00000021186Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
efemp2b / EGF containing fibulin extracellular matrix protein 2b / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG0000002081143
efemp2a / EGF containing fibulin extracellular matrix protein 2a / EFEMP2* / O95967* / Q9WVJ9* / EGF containing fibulin extracellular matrix protein 2* / EGF-containing fibulin-like extrace...ENSDARG0000009432443
si:ch73-173h19.3 / EFEMP1* / Q12805* / Q8BPB5* / EGF containing fibulin extracellular matrix protein 1* / EGF-containing fibulin-like extracellular matrix protein 1 *ENSDARG0000010421031
fbln2 / fibulin 2 / P37889* / P98095*ENSDARG0000001515631
FBLN1 / fibulin 1 / P23142*ENSDARG0000010331128
si:dkey-30j22.1ENSDARG0000004282926
BX663503.3 / LTBP4* / Q8K4G1* / Q8N2S1* / latent transforming growth factor beta binding protein 4*ENSDARG0000009913725
ltbp1 / latent transforming growth factor beta binding protein 1 / Q14766* / Q8CG19*ENSDARG0000005692225
CU570800.1 / EFEMP1* / Q12805* / EGF containing fibulin extracellular matrix protein 1*ENSDARG0000005912125
fbn2b / fibrillin 2bENSDARG0000009823725
fbn2a / fibrillin 2a / FBN1* / FBN2* / Q61555* / P35555* / P35556* / Q61554* / fibrillin 1* / fibrillin 2* / Fibrillin-1 Asprosin* / Fibrillin-2 Fibrillin-2 C-terminal peptide*ENSDARG0000005189624
FP102018.1 / Danio rerio latent transforming growth factor beta binding protein 3 (ltbp3), mRNA. / LTBP3* / Q9NS15* / latent transforming growth factor beta binding protein 3*ENSDARG0000003568220
si:ch73-105b23.1ENSDARG0000008755820
si:dkey-235d18.5ENSDARG0000003965217


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR026823  Complement Clr-like EGF domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048251 elastic fiber assembly IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Molecules associated with elastic fibres


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000090560 mfap5 / microfibril associated protein 5 / Q13361* / Q9QZJ6* / Microfibrillar-associated protein 5 *  / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr