ENSDARG00000041729


Danio rerio

Features
Gene ID: ENSDARG00000041729
  
Biological name :sntb1
  
Synonyms : sntb1 / syntrophin, basic 1
  
Possible biological names infered from orthology : Beta-1-syntrophin / Q13884 / Q99L88 / syntrophin beta 1
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 15164983
Gene end: 15263099
  
Corresponding Affymetrix probe sets: Dr.12127.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000105583
NCBI entrez gene - 431722     See in Manteia.
swissprot - Q6GMG2
ZFIN ID - ZDB-GENE-040704-13
Ensembl - ENSDARG00000041729
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNTB1ENSGALG00000034528Gallus gallus
 SNTB1ENSG00000172164Homo sapiens
 Sntb1ENSMUSG00000060429Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sntb2 / syntrophin, beta 2 / Q13425* / Q61235* / syntrophin, basic 2*ENSDARG0000005176349
SNTA1 / syntrophin alpha 1 / Q13424*ENSDARG0000009842036
sntg2 / syntrophin, gamma 2 / Q925E0* / Q9NY99* / Gamma-2-syntrophin *ENSDARG0000010166024
sntg1 / syntrophin, gamma 1 / Q9NSN8*ENSDARG0000006183222
gopc / golgi-associated PDZ and coiled-coil motif containing / Q8BH60* / Q9HD26* / AL132671.2*ENSDARG0000002311713
lin7a / lin-7 homolog A (C. elegans) / O14910* / Q8JZS0* / lin-7 homolog A, crumbs cell polarity complex component*ENSDARG0000001341412
lin7c / lin-7 homolog C (C. elegans)ENSDARG0000002732211
lin7b / lin-7 homolog B (C. elegans) / B * / O88951* / Q9HAP6* / lin-7 homolog B, crumbs cell polarity complex component*ENSDARG0000003793211


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015482  Syntrophin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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