ENSDARG00000051763


Danio rerio

Features
Gene ID: ENSDARG00000051763
  
Biological name :sntb2
  
Synonyms : sntb2 / syntrophin, beta 2
  
Possible biological names infered from orthology : Q13425 / Q61235 / syntrophin, basic 2
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 34915576
Gene end: 34938157
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067932
Ensembl peptide - ENSDARP00000146704
NCBI entrez gene - 100331323     See in Manteia.
RefSeq - XM_002666912
swissprot - E7FDL7
ZFIN ID - ZDB-GENE-131121-511
Ensembl - ENSDARG00000051763
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNTB2ENSGALG00000027482Gallus gallus
 SNTB2ENSG00000168807Homo sapiens
 Sntb2ENSMUSG00000041308Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sntb1 / syntrophin, basic 1 / Q99L88* / Q13884* / syntrophin beta 1* / Beta-1-syntrophin *ENSDARG0000004172948
SNTA1 / syntrophin alpha 1 / Q13424*ENSDARG0000009842034
sntg1 / syntrophin, gamma 1 / Q9NSN8*ENSDARG0000006183223
sntg2 / syntrophin, gamma 2 / Q925E0* / Q9NY99* / Gamma-2-syntrophin *ENSDARG0000010166023
gopc / golgi-associated PDZ and coiled-coil motif containing / Q8BH60* / Q9HD26* / AL132671.2*ENSDARG0000002311713
lin7c / lin-7 homolog C (C. elegans)ENSDARG0000002732210
lin7a / lin-7 homolog A (C. elegans) / O14910* / Q8JZS0* / lin-7 homolog A, crumbs cell polarity complex component*ENSDARG0000001341410
lin7b / lin-7 homolog B (C. elegans) / B * / O88951* / Q9HAP6* / lin-7 homolog B, crumbs cell polarity complex component*ENSDARG0000003793210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015482  Syntrophin
 IPR028550  Beta-2-syntrophin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr