ENSGALG00000027482


Gallus gallus

Features
Gene ID: ENSGALG00000027482
  
Biological name :SNTB2
  
Synonyms : SNTB2 / syntrophin beta 2
  
Possible biological names infered from orthology : Q13425 / Q61235 / syntrophin, basic 2
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 19162633
Gene end: 19169735
  
Corresponding Affymetrix probe sets: GgaAffx.410.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043176
NCBI entrez gene - 769654     See in Manteia.
RefSeq - XM_001232941
swissprot - R4GLT4
Ensembl - ENSGALG00000027482
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sntb2ENSDARG00000051763Danio rerio
 SNTB2ENSG00000168807Homo sapiens
 Sntb2ENSMUSG00000041308Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNTB1 / beta-1-syntrophin / Q13884* / Q99L88* / syntrophin beta 1*ENSGALG0000003452850
SNTA1 / syntrophin alpha 1 / Q13424* / Q61234* / Alpha-1-syntrophin *ENSGALG0000002969443
SNTG1 / syntrophin gamma 1 / Q9NSN8* / gamma-1-syntrophin isoform 3 *ENSGALG0000001524822
SNTG2 / syntrophin gamma 2 / Q925E0* / Q9NY99* / Gamma-2-syntrophin *ENSGALG0000001636720
GOPC* / Q8BH60* / Q9HD26* / AL132671.2* / golgi associated PDZ and coiled-coil motif containing*ENSGALG0000001490214
LIN7A / lin-7 homolog A, crumbs cell polarity complex component / O14910* / Q8JZS0* / lin-7 homolog A (C. elegans)*ENSGALG0000001093910
LIN7C / Q5F425 / Protein lin-7 homolog C / C * / Q9NUP9* / O88952* / lin-7 homolog C, crumbs cell polarity complex component*ENSGALG000000121709


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015482  Syntrophin
 IPR028550  Beta-2-syntrophin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr