ENSGALG00000014902


Gallus gallus

Features
Gene ID: ENSGALG00000014902
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AL132671.2 / golgi associated PDZ and coiled-coil motif containing / GOPC / Q8BH60 / Q9HD26
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 63370819
Gene end: 63395620
  
Corresponding Affymetrix probe sets: GgaAffx.9460.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023990
NCBI entrez gene - 770364     See in Manteia.
RefSeq - XM_015284489
RefSeq - XM_015284490
swissprot - F1N8T3
Ensembl - ENSGALG00000014902
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gopcENSDARG00000023117Danio rerio
 AL132671.2ENSG00000282218Homo sapiens
 GOPCENSG00000047932Homo sapiens
 GopcENSMUSG00000019861Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNTB1 / beta-1-syntrophin / Q13884* / Q99L88* / syntrophin beta 1*ENSGALG0000003452815
SNTB2 / syntrophin beta 2 / Q13425* / Q61235* / syntrophin, basic 2*ENSGALG0000002748215
SNTA1 / syntrophin alpha 1 / Q13424* / Q61234* / Alpha-1-syntrophin *ENSGALG0000002969414
SNTG2 / syntrophin gamma 2 / Q925E0* / Q9NY99* / Gamma-2-syntrophin *ENSGALG0000001636712
LIN7C / Q5F425 / Protein lin-7 homolog C / C * / Q9NUP9* / O88952* / lin-7 homolog C, crumbs cell polarity complex component*ENSGALG0000001217011
LIN7A / lin-7 homolog A, crumbs cell polarity complex component / O14910* / Q8JZS0* / lin-7 homolog A (C. elegans)*ENSGALG0000001093911
SNTG1 / syntrophin gamma 1 / Q9NSN8* / gamma-1-syntrophin isoform 3 *ENSGALG0000001524811


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007289 spermatid nucleus differentiation IEA
 biological_processGO:0050790 regulation of catalytic activity IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005109 frizzled binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0030695 GTPase regulator activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
RHO GTPases regulate CFTR trafficking


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000032986 CFTR / cystic fibrosis transmembrane conductance regulator / P13569* / P26361*  / complex
 ENSGALG00000014902 GOPC* / Q8BH60* / Q9HD26* / AL132671.2* / golgi associated PDZ and coiled-coil motif containing*  / complex






 

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