ENSGALG00000034528


Gallus gallus

Features
Gene ID: ENSGALG00000034528
  
Biological name :SNTB1
  
Synonyms : beta-1-syntrophin / SNTB1
  
Possible biological names infered from orthology : Q13884 / Q99L88 / syntrophin beta 1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 137075115
Gene end: 137183065
  
Corresponding Affymetrix probe sets: Gga.5935.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048251
NCBI entrez gene - 404774     See in Manteia.
RefSeq - NM_001005798
RefSeq - XM_015283067
RefSeq Peptide - NP_001005798
swissprot - A0A1D5P6C6
Ensembl - ENSGALG00000034528
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sntb1ENSDARG00000041729Danio rerio
 SNTB1ENSG00000172164Homo sapiens
 Sntb1ENSMUSG00000060429Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNTB2 / syntrophin beta 2 / Q13425* / Q61235* / syntrophin, basic 2*ENSGALG0000002748253
SNTA1 / syntrophin alpha 1 / Q13424* / Q61234* / Alpha-1-syntrophin *ENSGALG0000002969449
SNTG1 / syntrophin gamma 1 / Q9NSN8* / gamma-1-syntrophin isoform 3 *ENSGALG0000001524823
SNTG2 / syntrophin gamma 2 / Q925E0* / Q9NY99* / Gamma-2-syntrophin *ENSGALG0000001636723
GOPC* / Q8BH60* / Q9HD26* / AL132671.2* / golgi associated PDZ and coiled-coil motif containing*ENSGALG0000001490215
LIN7C / Q5F425 / Protein lin-7 homolog C / C * / Q9NUP9* / O88952* / lin-7 homolog C, crumbs cell polarity complex component*ENSGALG0000001217011
LIN7A / lin-7 homolog A, crumbs cell polarity complex component / O14910* / Q8JZS0* / lin-7 homolog A (C. elegans)*ENSGALG0000001093911


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015482  Syntrophin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr