ENSMUSG00000060429


Mus musculus

Features
Gene ID: ENSMUSG00000060429
  
Biological name :Sntb1
  
Synonyms : Beta-1-syntrophin / Q99L88 / Sntb1
  
Possible biological names infered from orthology : Q13884 / syntrophin beta 1
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: D1
Gene start: 55636388
Gene end: 55906949
  
Corresponding Affymetrix probe sets: 10428698 (MoGene1.0st)   1421455_at (Mouse Genome 430 2.0 Array)   1435987_x_at (Mouse Genome 430 2.0 Array)   1436203_a_at (Mouse Genome 430 2.0 Array)   1436204_at (Mouse Genome 430 2.0 Array)   1438288_x_at (Mouse Genome 430 2.0 Array)   1451938_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041294
Ensembl peptide - ENSMUSP00000105829
NCBI entrez gene - 20649     See in Manteia.
MGI - MGI:101781
RefSeq - XM_006520671
RefSeq - NM_016667
RefSeq Peptide - NP_057876
swissprot - Q99L88
Ensembl - ENSMUSG00000060429
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sntb1ENSDARG00000041729Danio rerio
 SNTB1ENSGALG00000034528Gallus gallus
 SNTB1ENSG00000172164Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sntb2 / Q61235 / syntrophin, basic 2 / Q13425* / syntrophin beta 2*ENSMUSG0000004130854
Snta1 / Q61234 / Alpha-1-syntrophin / Q13424* / syntrophin alpha 1*ENSMUSG0000002748848
Sntg2 / Q925E0 / Gamma-2-syntrophin / Q9NY99* / syntrophin gamma 2*ENSMUSG0000002067223
Sntg1 / gamma-1-syntrophin isoform 3 / Q9NSN8* / syntrophin gamma 1*ENSMUSG0000002590922
Gopc / Q8BH60 / golgi associated PDZ and coiled-coil motif containing / AL132671.2*ENSMUSG0000001986114
B / Lin7b / O88951 / Q9HAP6* / lin-7 homolog B, crumbs cell polarity complex component*ENSMUSG0000000387211
Lin7a / Q8JZS0 / lin-7 homolog A (C. elegans) / O14910* / lin-7 homolog A, crumbs cell polarity complex component*ENSMUSG0000001990611
C / Lin7c / O88952 / Q9NUP9* / lin-7 homolog C, crumbs cell polarity complex component*ENSMUSG0000002716210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015482  Syntrophin
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0042383 sarcolemma IEA
 cellular_componentGO:0045202 synapse IDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0030165 PDZ domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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