ENSMUSG00000020672


Mus musculus

Features
Gene ID: ENSMUSG00000020672
  
Biological name :Sntg2
  
Synonyms : Gamma-2-syntrophin / Q925E0 / Sntg2
  
Possible biological names infered from orthology : Q9NY99 / syntrophin gamma 2
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: A2
Gene start: 30174482
Gene end: 30373375
  
Corresponding Affymetrix probe sets: 10399801 (MoGene1.0st)   1418789_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000115942
Ensembl peptide - ENSMUSP00000123332
Ensembl peptide - ENSMUSP00000021004
Ensembl peptide - ENSMUSP00000114245
NCBI entrez gene - 268534     See in Manteia.
MGI - MGI:1919541
RefSeq - XM_017315072
RefSeq - NM_001324519
RefSeq - NM_001324520
RefSeq - NM_001324521
RefSeq - NM_172951
RefSeq - XM_006515108
RefSeq - XM_011243872
RefSeq Peptide - NP_001311448
RefSeq Peptide - NP_001311449
RefSeq Peptide - NP_001311450
RefSeq Peptide - NP_766539
swissprot - Q925E0
swissprot - D6RCX3
swissprot - D6RFR4
swissprot - D6RE37
Ensembl - ENSMUSG00000020672
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sntg2ENSDARG00000101660Danio rerio
 SNTG2ENSGALG00000016367Gallus gallus
 SNTG2ENSG00000172554Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sntg1 / gamma-1-syntrophin isoform 3 / Q9NSN8* / syntrophin gamma 1*ENSMUSG0000002590949
Snta1 / Q61234 / Alpha-1-syntrophin / Q13424* / syntrophin alpha 1*ENSMUSG0000002748826
Sntb2 / Q61235 / syntrophin, basic 2 / Q13425* / syntrophin beta 2*ENSMUSG0000004130823
Sntb1 / Q99L88 / Beta-1-syntrophin / Q13884* / syntrophin beta 1*ENSMUSG0000006042923
Gopc / Q8BH60 / golgi associated PDZ and coiled-coil motif containing / AL132671.2*ENSMUSG0000001986113
Lin7a / Q8JZS0 / lin-7 homolog A (C. elegans) / O14910* / lin-7 homolog A, crumbs cell polarity complex component*ENSMUSG0000001990610
B / Lin7b / O88951 / Q9HAP6* / lin-7 homolog B, crumbs cell polarity complex component*ENSMUSG000000038729
C / Lin7c / O88952 / Q9NUP9* / lin-7 homolog C, crumbs cell polarity complex component*ENSMUSG000000271629


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015482  Syntrophin
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0042383 sarcolemma IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030165 PDZ domain binding IEA
 molecular_functionGO:0097109 neuroligin family protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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