ENSMUSG00000025909


Mus musculus

Features
Gene ID: ENSMUSG00000025909
  
Biological name :Sntg1
  
Synonyms : gamma-1-syntrophin isoform 3 / Sntg1
  
Possible biological names infered from orthology : Q9NSN8 / syntrophin gamma 1
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: A2
Gene start: 8361475
Gene end: 9299878
  
Corresponding Affymetrix probe sets: 10352980 (MoGene1.0st)   1432287_a_at (Mouse Genome 430 2.0 Array)   1440598_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000123632
Ensembl peptide - ENSMUSP00000122134
Ensembl peptide - ENSMUSP00000141839
Ensembl peptide - ENSMUSP00000111151
Ensembl peptide - ENSMUSP00000117397
Ensembl peptide - ENSMUSP00000118101
NCBI entrez gene - 71096     See in Manteia.
MGI - MGI:1918346
RefSeq - XM_017312325
RefSeq - NM_001290393
RefSeq - NM_027671
RefSeq - XM_006495572
RefSeq - XM_006495573
RefSeq - XM_011238407
RefSeq - XM_017312320
RefSeq - XM_017312321
RefSeq - XM_017312324
RefSeq - NM_001290390
RefSeq - NM_001290392
RefSeq Peptide - NP_081947
RefSeq Peptide - NP_001277319
RefSeq Peptide - NP_001277321
RefSeq Peptide - NP_001277322
swissprot - D6REU8
swissprot - Q8BNW6
swissprot - Q8C415
swissprot - D6RJM3
Ensembl - ENSMUSG00000025909
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sntg1ENSDARG00000061832Danio rerio
 SNTG1ENSGALG00000015248Gallus gallus
 SNTG1ENSG00000147481Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sntg2 / Q925E0 / Gamma-2-syntrophin / Q9NY99* / syntrophin gamma 2*ENSMUSG0000002067251
Snta1 / Q61234 / Alpha-1-syntrophin / Q13424* / syntrophin alpha 1*ENSMUSG0000002748825
Sntb2 / Q61235 / syntrophin, basic 2 / Q13425* / syntrophin beta 2*ENSMUSG0000004130824
Sntb1 / Q99L88 / Beta-1-syntrophin / Q13884* / syntrophin beta 1*ENSMUSG0000006042923
Gopc / Q8BH60 / golgi associated PDZ and coiled-coil motif containing / AL132671.2*ENSMUSG0000001986111
Lin7a / Q8JZS0 / lin-7 homolog A (C. elegans) / O14910* / lin-7 homolog A, crumbs cell polarity complex component*ENSMUSG000000199069
B / Lin7b / O88951 / Q9HAP6* / lin-7 homolog B, crumbs cell polarity complex component*ENSMUSG000000038728
C / Lin7c / O88952 / Q9NUP9* / lin-7 homolog C, crumbs cell polarity complex component*ENSMUSG000000271628


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015482  Syntrophin
 IPR015483  Gamma 1 syntrophin
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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