ENSG00000147481


Homo sapiens

Features
Gene ID: ENSG00000147481
  
Biological name :SNTG1
  
Synonyms : Q9NSN8 / SNTG1 / syntrophin gamma 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q11.21
Gene start: 49909789
Gene end: 50796691
  
Corresponding Affymetrix probe sets: 1562287_at (Human Genome U133 Plus 2.0 Array)   220405_at (Human Genome U133 Plus 2.0 Array)   234919_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000493900
Ensembl peptide - ENSP00000428558
Ensembl peptide - ENSP00000429276
Ensembl peptide - ENSP00000429363
Ensembl peptide - ENSP00000429842
Ensembl peptide - ENSP00000430748
Ensembl peptide - ENSP00000431123
Ensembl peptide - ENSP00000493658
Ensembl peptide - ENSP00000494442
Ensembl peptide - ENSP00000494713
Ensembl peptide - ENSP00000494759
Ensembl peptide - ENSP00000494929
Ensembl peptide - ENSP00000494958
Ensembl peptide - ENSP00000494985
Ensembl peptide - ENSP00000495100
Ensembl peptide - ENSP00000495470
Ensembl peptide - ENSP00000495550
Ensembl peptide - ENSP00000496116
Ensembl peptide - ENSP00000496147
Ensembl peptide - ENSP00000496330
Ensembl peptide - ENSP00000496525
NCBI entrez gene - 54212     See in Manteia.
OMIM - 608714
RefSeq - XM_017013580
RefSeq - XM_017013581
RefSeq - XM_017013582
RefSeq - NM_001287813
RefSeq - NM_001287814
RefSeq - XM_011517548
RefSeq - XM_017013579
RefSeq - NM_001321773
RefSeq - NM_001321775
RefSeq - NM_001321776
RefSeq - NM_001321777
RefSeq - NM_001321778
RefSeq - NM_018967
RefSeq Peptide - NP_001308706
RefSeq Peptide - NP_061840
RefSeq Peptide - NP_001274743
RefSeq Peptide - NP_001308702
RefSeq Peptide - NP_001308704
RefSeq Peptide - NP_001308705
RefSeq Peptide - NP_001308707
RefSeq Peptide - NP_001274742
swissprot - Q9NSN8
swissprot - A0A024R7Y0
swissprot - H0YC21
swissprot - E5RHN6
swissprot - E5RIN0
Ensembl - ENSG00000147481
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sntg1ENSDARG00000061832Danio rerio
 SNTG1ENSGALG00000015248Gallus gallus
 Sntg1ENSMUSG00000025909Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNTG2 / Q9NY99 / syntrophin gamma 2ENSG0000017255450
SNTA1 / Q13424 / syntrophin alpha 1ENSG0000010140025
SNTB2 / Q13425 / syntrophin beta 2ENSG0000016880724
SNTB1 / Q13884 / syntrophin beta 1ENSG0000017216423
GOPC / Q9HD26 / golgi associated PDZ and coiled-coil motif containingENSG0000004793212
AL132671.2ENSG0000028221810
LIN7B / Q9HAP6 / lin-7 homolog B, crumbs cell polarity complex componentENSG000001048638
LIN7A / O14910 / lin-7 homolog A, crumbs cell polarity complex componentENSG000001110528
LIN7C / Q9NUP9 / lin-7 homolog C, crumbs cell polarity complex componentENSG000001489438


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015482  Syntrophin
 IPR015483  Gamma 1 syntrophin
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IDA
 cellular_componentGO:0016013 syntrophin complex TAS
 cellular_componentGO:0032587 ruffle membrane IDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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