ENSG00000168807


Homo sapiens

Features
Gene ID: ENSG00000168807
  
Biological name :SNTB2
  
Synonyms : Q13425 / SNTB2 / syntrophin beta 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q22.1
Gene start: 69187129
Gene end: 69309052
  
Corresponding Affymetrix probe sets: 205314_x_at (Human Genome U133 Plus 2.0 Array)   205315_s_at (Human Genome U133 Plus 2.0 Array)   213814_s_at (Human Genome U133 Plus 2.0 Array)   214350_at (Human Genome U133 Plus 2.0 Array)   226685_at (Human Genome U133 Plus 2.0 Array)   227312_at (Human Genome U133 Plus 2.0 Array)   238925_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000436443
Ensembl peptide - ENSP00000462765
Ensembl peptide - ENSP00000338191
Ensembl peptide - ENSP00000353686
Ensembl peptide - ENSP00000432201
NCBI entrez gene - 6645     See in Manteia.
OMIM - 600027
RefSeq - NM_006750
RefSeq Peptide - NP_006741
swissprot - H7BY41
swissprot - A0A024R732
swissprot - Q13425
swissprot - J3KT21
swissprot - H0YCS0
Ensembl - ENSG00000168807
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sntb2ENSDARG00000051763Danio rerio
 SNTB2ENSGALG00000027482Gallus gallus
 Sntb2ENSMUSG00000041308Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNTB1 / Q13884 / syntrophin beta 1ENSG0000017216456
SNTA1 / Q13424 / syntrophin alpha 1ENSG0000010140044
SNTG1 / Q9NSN8 / syntrophin gamma 1ENSG0000014748123
SNTG2 / Q9NY99 / syntrophin gamma 2ENSG0000017255423
GOPC / Q9HD26 / golgi associated PDZ and coiled-coil motif containingENSG0000004793216
AL132671.2ENSG0000028221811
LIN7C / Q9NUP9 / lin-7 homolog C, crumbs cell polarity complex componentENSG0000014894310
LIN7A / O14910 / lin-7 homolog A, crumbs cell polarity complex componentENSG0000011105210
LIN7B / Q9HAP6 / lin-7 homolog B, crumbs cell polarity complex componentENSG0000010486310


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015482  Syntrophin
 IPR028550  Beta-2-syntrophin
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0016010 dystrophin-associated glycoprotein complex TAS
 cellular_componentGO:0016020 membrane TAS
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030658 transport vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0032991 protein-containing complex IDA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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