ENSDARG00000042646


Danio rerio

Features
Gene ID: ENSDARG00000042646
  
Biological name :zgc:77784
  
Synonyms : zgc:77784
  
Possible biological names infered from orthology : Q96MS0 / ROBO3 / roundabout guidance receptor 3
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 19456112
Gene end: 19602329
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062559
Ensembl peptide - ENSDARP00000118709
Ensembl peptide - ENSDARP00000128123
Ensembl peptide - ENSDARP00000129480
swissprot - F1QDQ7
swissprot - F1QLC6
swissprot - X1WD26
swissprot - X1WGX1
ZFIN ID - ZDB-GENE-040426-1874
Ensembl - ENSDARG00000042646
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ROBO3ENSGALG00000045816Gallus gallus
 ROBO3ENSG00000154134Homo sapiens
 Robo3ENSMUSG00000032128Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
robo3 / roundabout, axon guidance receptor, homolog 3 (Drosophila) / Q96MS0* / roundabout guidance receptor 3*ENSDARG0000000564563
robo2 / roundabout, axon guidance receptor, homolog 2 (Drosophila)ENSDARG0000007836663
robo1 / roundabout, axon guidance receptor, homolog 1 (Drosophila) / Q9Y6N7* / roundabout guidance receptor 1*ENSDARG0000002678463
robo4 / roundabout, axon guidance receptor, homolog 4 (Drosophila) / Q8WZ75* / roundabout guidance receptor 4*ENSDARG0000000938738
boc / BOC cell adhesion associated, oncogene regulated / Q9BWV1*ENSDARG0000007433519
ncam3 / neural cell adhesion molecule 3ENSDARG0000008958616
ncam2 / neural cell adhesion molecule 2 / O15394* / O35136*ENSDARG0000001746616
cdon / cell adhesion associated, oncogene regulated / Q32MD9* / Q4KMG0* / Cell adhesion molecule-related/down-regulated by oncos *ENSDARG0000006132816
ncam1b / neural cell adhesion molecule 1b / NCAM1* / P13591* / neural cell adhesion molecule 1* / neural cell adhesion molecule 1 isoform 3 *ENSDARG0000000722015
BX908388.2ENSDARG0000011377412
ncam1a / neural cell adhesion molecule 1a / NCAM1* / P13591* / neural cell adhesion molecule 1* / neural cell adhesion molecule 1 isoform 3 *ENSDARG000000561815
robo2 / roundabout, axon guidance receptor, homolog 2 (Drosophila)ENSDARG000000148914


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR032987  Roundabout homologue 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0035385 Roundabout signaling pathway IEA
 cellular_componentGO:0030424 axon IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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