ENSDARG00000061328


Danio rerio

Features
Gene ID: ENSDARG00000061328
  
Biological name :cdon
  
Synonyms : cdon / cell adhesion associated, oncogene regulated
  
Possible biological names infered from orthology : Cell adhesion molecule-related/down-regulated by oncos / Q32MD9 / Q4KMG0
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 44053052
Gene end: 44129151
  
Corresponding Affymetrix probe sets: Dr.14422.1.A1_at (Zebrafish Array)   Dr.14422.2.S1_at (Zebrafish Array)   Dr.14422.3.A1_x_at (Zebrafish Array)   NM_001081628_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000081773
NCBI entrez gene - 280652     See in Manteia.
RefSeq - XM_009293823
RefSeq - NM_001081628
RefSeq Peptide - NP_001075097
swissprot - Q1L8D0
ZFIN ID - ZDB-GENE-021115-4
Ensembl - ENSDARG00000061328
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDONENSGALG00000035419Gallus gallus
 CDONENSG00000064309Homo sapiens
 CdonENSMUSG00000038119Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
boc / BOC cell adhesion associated, oncogene regulated / Q9BWV1*ENSDARG0000007433533
robo1 / roundabout, axon guidance receptor, homolog 1 (Drosophila) / Q9Y6N7* / roundabout guidance receptor 1*ENSDARG0000002678418
robo3 / roundabout, axon guidance receptor, homolog 3 (Drosophila) / Q96MS0* / roundabout guidance receptor 3*ENSDARG0000000564516
robo2 / roundabout, axon guidance receptor, homolog 2 (Drosophila)ENSDARG0000001489115
ncam1a / neural cell adhesion molecule 1a / NCAM1* / P13591* / neural cell adhesion molecule 1* / neural cell adhesion molecule 1 isoform 3 *ENSDARG0000005618114
ncam1b / neural cell adhesion molecule 1b / NCAM1* / P13591* / neural cell adhesion molecule 1* / neural cell adhesion molecule 1 isoform 3 *ENSDARG0000000722014
robo4 / roundabout, axon guidance receptor, homolog 4 (Drosophila) / Q8WZ75* / roundabout guidance receptor 4*ENSDARG0000000938713
ncam2 / neural cell adhesion molecule 2 / O15394* / O35136*ENSDARG0000001746612
ncam3 / neural cell adhesion molecule 3ENSDARG0000008958611
BX908388.2ENSDARG000001137748
robo2 / roundabout, axon guidance receptor, homolog 2 (Drosophila)ENSDARG000000783662
zgc:77784 / ROBO3* / Q96MS0* / roundabout guidance receptor 3*ENSDARG000000426462


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR032983  Cell adhesion molecule-related/down-regulated by oncogenes


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0045663 positive regulation of myoblast differentiation IEA
 biological_processGO:0045664 regulation of neuron differentiation IEA
 biological_processGO:0045879 negative regulation of smoothened signaling pathway IMP
 biological_processGO:0048598 embryonic morphogenesis IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001284 optic fissure optic fissure closure incomplete , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000042021 O42376 / mapk12a / mitogen-activated protein kinase 12a / O08911* / MAPK12* / P53778* / mitogen-activated protein kinase 12*  / complex
 ENSDARG00000014571 ctnnb1 / catenin (cadherin-associated protein), beta 1 / P35222* / catenin beta 1*  / complex / reaction
 ENSDARG00000045836 mapk11 / mitogen-activated protein kinase 11 / Q15759* / Q9WUI1*  / complex
 ENSDARG00000006409 mapk12b / mitogen-activated protein kinase 12b / P53778* / MAPK12* / O08911* / mitogen-activated protein kinase 12*  / complex
 ENSDARG00000028721 mapk14b / mitogen-activated protein kinase 14b / Q16539* / MAPK14* / P47811* / mitogen-activated protein kinase 14*  / complex
 ENSDARG00000000857 Q9DGE2 / mapk14a / mitogen-activated protein kinase 14a / P47811* / Q16539* / MAPK14* / mitogen-activated protein kinase 14*  / complex
 ENSDARG00000013397 bnip2 / BCL2 interacting protein 2 / O54940* / Q12982* / BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 *  / complex
 ENSDARG00000044573 cdc42 / cell division cycle 42 / P60766* / P60953* / Cell division control *  / complex
 ENSDARG00000068191 cdh15 / cadherin 15, type 1, M-cadherin (myotubule) / P33146* / P55291* / cadherin 15*  / complex / reaction
 ENSDARG00000024785 B7ZC77 / ctnna2 / catenin (cadherin-associated protein), alpha 2 / Q61301* / P26232* / catenin alpha 2* / Mus musculus catenin (cadherin associated protein), alpha 2 (Ctnna2), transcript va...  / reaction / complex
 ENSDARG00000035187 abl1 / c-abl oncogene 1, non-receptor tyrosine kinase / P00519* / P00520* / ABL proto-oncogene 1, non-receptor tyrosine kinase*  / complex
 ENSDARG00000102441 ctnna1 / catenin (cadherin-associated protein), alpha 1 / P26231* / P35221* / catenin alpha 1*  / complex / reaction






 

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