ENSG00000064309


Homo sapiens

Features
Gene ID: ENSG00000064309
  
Biological name :CDON
  
Synonyms : CDON / cell adhesion associated, oncogene regulated / Q4KMG0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q24.2
Gene start: 125955796
Gene end: 126063335
  
Corresponding Affymetrix probe sets: 1563677_at (Human Genome U133 Plus 2.0 Array)   207230_at (Human Genome U133 Plus 2.0 Array)   227526_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000432571
Ensembl peptide - ENSP00000437176
Ensembl peptide - ENSP00000436940
Ensembl peptide - ENSP00000436755
Ensembl peptide - ENSP00000434212
Ensembl peptide - ENSP00000432901
Ensembl peptide - ENSP00000263577
Ensembl peptide - ENSP00000376458
NCBI entrez gene - 50937     See in Manteia.
OMIM - 608707
RefSeq - XM_017017873
RefSeq - XM_011542866
RefSeq - XM_011542865
RefSeq - XM_011542864
RefSeq - XM_011542863
RefSeq - NM_001243597
RefSeq - XM_011542862
RefSeq - NM_016952
RefSeq Peptide - NP_001230526
RefSeq Peptide - NP_058648
swissprot - Q4KMG0
swissprot - E9PRD8
swissprot - H0YEX4
swissprot - H0YCZ4
swissprot - E9PN78
swissprot - E9PNF2
swissprot - E9PPQ7
Ensembl - ENSG00000064309
  
Related genetic diseases (OMIM): 614226 - Holoprosencephaly 11, 614226
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdonENSDARG00000061328Danio rerio
 CDONENSGALG00000035419Gallus gallus
 CdonENSMUSG00000038119Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BOC / Q9BWV1 / BOC cell adhesion associated, oncogene regulatedENSG0000014485734
ROBO1 / Q9Y6N7 / roundabout guidance receptor 1ENSG0000016985519
ROBO2 / Q9HCK4 / roundabout guidance receptor 2ENSG0000018500819
ROBO3 / Q96MS0 / roundabout guidance receptor 3ENSG0000015413417
NCAM1 / P13591 / neural cell adhesion molecule 1ENSG0000014929413
NCAM2 / O15394 / neural cell adhesion molecule 2ENSG0000015465413
ROBO4 / Q8WZ75 / roundabout guidance receptor 4ENSG0000015413312


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032983  Cell adhesion molecule-related/down-regulated by oncogenes
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001708 cell fate specification IEA
 biological_processGO:0001934 positive regulation of protein phosphorylation IEA
 biological_processGO:0002088 lens development in camera-type eye IEA
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0007520 myoblast fusion IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0010172 embryonic body morphogenesis IEA
 biological_processGO:0014816 skeletal muscle satellite cell differentiation IEA
 biological_processGO:0021987 cerebral cortex development IEA
 biological_processGO:0043410 positive regulation of MAPK cascade IEA
 biological_processGO:0043497 regulation of protein heterodimerization activity IEA
 biological_processGO:0045663 positive regulation of myoblast differentiation IEA
 biological_processGO:0045664 regulation of neuron differentiation IEA
 biological_processGO:0045666 positive regulation of neuron differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048598 embryonic morphogenesis IEA
 biological_processGO:0048643 positive regulation of skeletal muscle tissue development IEA
 biological_processGO:0051057 positive regulation of small GTPase mediated signal transduction IEA
 biological_processGO:0051146 striated muscle cell differentiation IEA
 biological_processGO:0051149 positive regulation of muscle cell differentiation TAS
 biological_processGO:0060059 embryonic retina morphogenesis in camera-type eye IEA
 biological_processGO:2000179 positive regulation of neural precursor cell proliferation IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031012 extracellular matrix TAS
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis
Ligand-receptor interactions
Activation of SMO


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000520 Proptosis 
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 HP:0000574 Thick eyebrows 
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 HP:0000601 Hypotelorism 
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 HP:0000664 Synophrys "Fusion of the left and right `eyebrow` (FMA:54237)." [HPO:probinson]
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 HP:0000786 Primary amenorrhea 
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 HP:0000821 Hypothyroidism 
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 HP:0000823 Delayed puberty 
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 HP:0000835 Adrenal hypoplasia 
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 HP:0000873 Diabetes insipidus "A state of excessive water intake and hypotonic (dilute) polyuria. Diabetes insipidus may be due to failure of vasopressin (AVP) release (central or neurogenic diabetes insipidus) or to a failure of the kidney to respond to AVP (nephrogenic diabetes insipidus)." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001360 Holoprosencephaly "Holoprosencephaly is a structural anomaly of the brain in which the developing forebrain fails to divide into two separate hemispheres and ventricles." [gc:hpe]
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 HP:0001508 Failure to thrive 
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 HP:0001522 Death in infancy 
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 HP:0001748 Polysplenia "Polysplenia is a congenital disease manifested by multiple small accessory spleens." [HPO:curators]
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0003745 Sporadic 
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 HP:0003828 Variable expressivity 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0008736 Hypoplasia of penis 
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 HP:0011755 Ectopic posterior pituitary "An abnormal anatomical location of the posterior lobe of the hypophysis, also known as the `neurohypophysis` (FMA:74628). The posterior pituitary is normally present in the dorsal portion of the sella turcica, but when ectopic is usually near the median eminence. This defect is likely to be due to abnormal migration during embryogenesis." [DDD:spark, HPO:probinson]
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 HP:0100842 Septo-optic dysplasia "Underdevelopment of the optic nerve and absence of the septum pellucidum." [HPO:sdoelken]
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 HP:0410030 Cleft lip "A gap in the lip or lips." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000188130 MAPK12 / P53778 / mitogen-activated protein kinase 12  / complex / reaction
 ENSG00000112062 MAPK14 / Q16539 / mitogen-activated protein kinase 14  / complex / reaction
 ENSG00000044115 CTNNA1 / P35221 / catenin alpha 1  / reaction / complex
 ENSG00000162068 NTN3 / O00634 / netrin 3  / reaction / complex
 ENSG00000168036 CTNNB1 / P35222 / catenin beta 1  / complex / reaction
 ENSG00000066032 CTNNA2 / P26232 / catenin alpha 2  / reaction / complex
 ENSG00000170558 CDH2 / P19022 / cadherin 2  / reaction / complex
 ENSG00000067141 NEO1 / Q92859 / neogenin 1  / complex / reaction
 ENSG00000129910 CDH15 / P55291 / cadherin 15  / complex / reaction
 ENSG00000008294 SPAG9 / O60271 / sperm associated antigen 9  / complex / reaction
 ENSG00000164690 SHH / Q15465 / sonic hedgehog  / reaction / complex
 ENSG00000070831 CDC42 / P60953 / cell division cycle 42  / reaction / complex
 ENSG00000144857 BOC / Q9BWV1 / BOC cell adhesion associated, oncogene regulated  / complex / reaction
 ENSG00000140299 BNIP2 / Q12982 / BCL2 interacting protein 2  / reaction / complex
 ENSG00000097007 ABL1 / P00519 / ABL proto-oncogene 1, non-receptor tyrosine kinase  / reaction / complex
 ENSG00000185920 PTCH1 / Q13635 / patched 1  / complex / reaction
 ENSG00000185386 MAPK11 / Q15759 / mitogen-activated protein kinase 11  / reaction / complex






 

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