ENSDARG00000045864


Danio rerio

Features
Gene ID: ENSDARG00000045864
  
Biological name :lmod2b
  
Synonyms : leiomodin 2 (cardiac) b / lmod2b
  
Possible biological names infered from orthology : leiomodin 2 / LMOD2 / Q3UHZ5 / Q6P5Q4
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 4115778
Gene end: 4119425
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067408
Ensembl peptide - ENSDARP00000117250
NCBI entrez gene - 664708     See in Manteia.
swissprot - F1Q5L7
swissprot - F1QPI5
ZFIN ID - ZDB-GENE-041210-356
Ensembl - ENSDARG00000045864
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LMOD2ENSGALG00000008805Gallus gallus
 LMOD2ENSG00000170807Homo sapiens
 Lmod2ENSMUSG00000029683Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lmod1a / leiomodin 1a (smooth muscle) / LMOD1* / P29536* / leiomodin 1*ENSDARG0000005611131
lmod3 / E7F7X0 / leiomodin 3 (fetal) / Q0VAK6* / E9QA62* / leiomodin 3*ENSDARG0000006266229
lmod2a / leiomodin 2 (cardiac) a / LMOD2* / Q3UHZ5* / Q6P5Q4* / leiomodin 2*ENSDARG0000004563429
lmod1b / leiomodin 1b (smooth muscle) / LMOD1* / P29536* / leiomodin 1*ENSDARG0000007726128
tmod1 / tropomodulin 1 / P28289* / P49813*ENSDARG0000007831822
tmod2 / tropomodulin 2 / TMOD3* / Q9NZR1* / Q9JHJ0* / Q9JKK7* / Q9NYL9* / tropomodulin 3*ENSDARG0000000257121
tmod4 / tropomodulin 4 (muscle) / Q9JLH8* / Q9NZQ9* / tropomodulin 4*ENSDARG0000002089020


Protein motifs (from Interpro)
Interpro ID Name
 IPR004934  Tropomodulin
 IPR030132  Leiomodin-2
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IBA
 biological_processGO:0007015 actin filament organization IBA
 biological_processGO:0030239 myofibril assembly IBA
 biological_processGO:0051694 pointed-end actin filament capping IEA
 cellular_componentGO:0005865 striated muscle thin filament IBA
 molecular_functionGO:0005523 tropomyosin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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