ENSDARG00000002571


Danio rerio

Features
Gene ID: ENSDARG00000002571
  
Biological name :tmod2
  
Synonyms : tmod2 / tropomodulin 2
  
Possible biological names infered from orthology : Q9JHJ0 / Q9JKK7 / Q9NYL9 / Q9NZR1 / TMOD3 / tropomodulin 3
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 39327010
Gene end: 39382869
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000018319
NCBI entrez gene - 447869     See in Manteia.
RefSeq - NM_001004608
RefSeq Peptide - NP_001004608
swissprot - F1QJZ6
ZFIN ID - ZDB-GENE-040912-185
Ensembl - ENSDARG00000002571
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMOD2ENSGALG00000004740Gallus gallus
 TMOD3ENSGALG00000004710Gallus gallus
 TMOD2ENSG00000128872Homo sapiens
 TMOD3ENSG00000138594Homo sapiens
 Tmod2ENSMUSG00000032186Mus musculus
 Tmod3ENSMUSG00000058587Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmod1 / tropomodulin 1 / P28289* / P49813*ENSDARG0000007831860
tmod4 / tropomodulin 4 (muscle) / Q9JLH8* / Q9NZQ9* / tropomodulin 4*ENSDARG0000002089058
lmod3 / E7F7X0 / leiomodin 3 (fetal) / Q0VAK6* / E9QA62* / leiomodin 3*ENSDARG0000006266239
lmod2b / leiomodin 2 (cardiac) b / LMOD2* / Q3UHZ5* / Q6P5Q4* / leiomodin 2*ENSDARG0000004586437
lmod2a / leiomodin 2 (cardiac) a / LMOD2* / Q3UHZ5* / Q6P5Q4* / leiomodin 2*ENSDARG0000004563433
lmod1a / leiomodin 1a (smooth muscle) / LMOD1* / P29536* / leiomodin 1*ENSDARG0000005611132
lmod1b / leiomodin 1b (smooth muscle) / LMOD1* / P29536* / leiomodin 1*ENSDARG0000007726124


Protein motifs (from Interpro)
Interpro ID Name
 IPR004934  Tropomodulin
 IPR030133  Tropomodulin-3
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IBA
 biological_processGO:0007015 actin filament organization IBA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0030239 myofibril assembly IBA
 biological_processGO:0048821 erythrocyte development IEA
 biological_processGO:0051694 pointed-end actin filament capping IEA
 cellular_componentGO:0005865 striated muscle thin filament IBA
 molecular_functionGO:0005523 tropomyosin binding IBA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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