ENSDARG00000056134


Danio rerio

Features
Gene ID: ENSDARG00000056134
  
Biological name :c1qtnf5
  
Synonyms : C1q and TNF related 5 / c1qtnf5
  
Possible biological names infered from orthology : Complement C1q tumor necrosis factor-related protein 5 / Q8K479 / Q9BXJ0
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 23369020
Gene end: 23376541
  
Corresponding Affymetrix probe sets: Dr.965.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000073031
NCBI entrez gene - 555815     See in Manteia.
RefSeq - NM_001029953
RefSeq Peptide - NP_001025124
swissprot - Q4KMC6
ZFIN ID - ZDB-GENE-050706-101
Ensembl - ENSDARG00000056134
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C1QTNF5ENSGALG00000006758Gallus gallus
 Q9BXJ0ENSG00000223953Homo sapiens
 Q8K479ENSMUSG00000079592Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
c1qtnf9 / C1q and TNF related 9 / B2RNN3* / P0C862* / C1QTNF9B* / C1q and TNF related 9B*ENSDARG0000005831838
A5PN28 / otol1a / otolin 1a / OTOL1* / Q4ZJM7* / A6NHN0* / otolin 1*ENSDARG0000000177135
c1qtnf7 / C1q and TNF related 7 / Q9BXJ2*ENSDARG0000007494934
otol1b / otolin 1b / OTOL1* / A6NHN0* / Q4ZJM7* / otolin 1*ENSDARG0000005896033
c1qtnf2 / C1q and TNF related 2 / Q9BXJ5* / Q9D8U4* / Complement C1q tumor necrosis factor-related protein 2 *ENSDARG0000005994433
col8a1a / collagen, type VIII, alpha 1a / COL8A1* / P27658* / Q00780* / collagen type VIII alpha 1 chain* / Collagen alpha-1(VIII) chain Vastatin*ENSDARG0000007740332
col8a2 / collagen, type VIII, alpha 2 / P25318* / P25067* / Collagen alpha-2(VIII) chain * / collagen type VIII alpha 2 chain*ENSDARG0000006089331
col10a1b / collagen, type X, alpha 1b / Q03692* / COL10A1* / collagen type X alpha 1 chain*ENSDARG0000010153531
col8a1b / collagen, type VIII, alpha 1b / COL8A1* / P27658* / Q00780* / collagen type VIII alpha 1 chain* / Collagen alpha-1(VIII) chain Vastatin*ENSDARG0000000353330
adipoqa / adiponectin, C1Q and collagen domain containing, a / Q60994* / ADIPOQ* / Q15848* / Adiponectin * / adiponectin, C1Q and collagen domain containing*ENSDARG0000006222830
adipoqb / adiponectin, C1Q and collagen domain containing, b / Q60994* / ADIPOQ* / Q15848* / Adiponectin * / adiponectin, C1Q and collagen domain containing*ENSDARG0000010008630
c1qc / complement component 1, q subcomponent, C chain / P02747* / Q02105* / complement C1q C chain* / Complement C1q subcomponent subunit C *ENSDARG0000009562730
col10a1a / collagen, type X, alpha 1a / Q05306* / Q03692* / COL10A1* / Collagen alpha-1(X) chain * / collagen type X alpha 1 chain*ENSDARG0000005475330
CABZ01067232.1ENSDARG0000005740827
c1qb / complement component 1, q subcomponent, B chain / P02746* / P14106* / complement C1q B chain* / Complement C1q subcomponent subunit B *ENSDARG0000004461222


Protein motifs (from Interpro)
Interpro ID Name
 IPR001073  C1q domain
 IPR008160  Collagen triple helix repeat
 IPR008983  Tumour necrosis factor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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