Manteia

ENSDARG00000056780

Danio rerio

Features

Gene ID:	ENSDARG00000056780

Biological name :	ssh1a

Synonyms :	slingshot protein phosphatase 1a / ssh1a

Possible biological names infered from orthology :	Protein phosphatase Slingshot homolog 1 / Q76I79 / Q8WYL5 / slingshot protein phosphatase 1 / SSH1

Species:	Danio rerio

Chr. number:	5
Strand:	1
Band:
Gene start:	20255568
Gene end:	20289292

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000105370 Ensembl peptide - ENSDARP00000129745 swissprot - F1QP60 swissprot - X1WHN2 ZFIN ID - ZDB-GENE-040724-201 Ensembl - ENSDARG00000056780

See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
SSH1	ENSGALG00000004928	Gallus gallus
SSH1	ENSG00000084112	Homo sapiens
Ssh1	ENSMUSG00000042121	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
ssh1b / slingshot protein phosphatase 1b / SSH1* / Q76I79* / Q8WYL5* / slingshot protein phosphatase 1* / Protein phosphatase Slingshot homolog 1 *	ENSDARG00000010031	54
ssh2b / slingshot protein phosphatase 2b / SSH2* / Q5SW75* / Q76I76* / slingshot protein phosphatase 2* / Protein phosphatase Slingshot homolog 2 *	ENSDARG00000098955	48
ssh2a / slingshot protein phosphatase 2a / SSH2* / Q5SW75* / Q76I76* / slingshot protein phosphatase 2* / Protein phosphatase Slingshot homolog 2 *	ENSDARG00000088440	48
si:ch211-203d1.3 / SSH3* / Q8TE77* / Q8K330* / slingshot protein phosphatase 3* / Mus musculus slingshot protein phosphatase 3 (Ssh3), transcript variant 2, mRNA.*	ENSDARG00000079591	35
dusp8a / dual specificity phosphatase 8a / DUSP8* / Q13202* / O09112* / dual specificity phosphatase 8* / Dual specificity protein phosphatase 8 *	ENSDARG00000009299	13
dusp10 / dual specificity phosphatase 10 / Q9ESS0* / Q9Y6W6* / Dual specificity protein phosphatase 10 *	ENSDARG00000052465	12
dusp4 / dual specificity phosphatase 4 / Q13115* / Q8BFV3* / Dual specificity protein phosphatase 4 *	ENSDARG00000044688	12
dusp16 / dual specificity phosphatase 16 / Q9BY84*	ENSDARG00000102474	12
dusp6 / dual specificity phosphatase 6 / Q16828* / Q9DBB1* / Dual specificity protein phosphatase 6 *	ENSDARG00000070914	12
dusp7 / dual specificity phosphatase 7 / Q16829*	ENSDARG00000101413	12
dusp1 / dual specificity phosphatase 1 / P28562* / P28563* / Dual specificity protein phosphatase 1 *	ENSDARG00000100515	11
dusp5 / dual specificity phosphatase 5 / Q16690*	ENSDARG00000019307	11
si:dkey-175m17.7	ENSDARG00000078317	10
dusp2 / dual specificity phosphatase 2 / Q05923*	ENSDARG00000098108	10
si:ch211-195b15.8	ENSDARG00000094836	8

Protein motifs (from Interpro)

Interpro ID	Name
IPR000340	Dual specificity phosphatase, catalytic domain
IPR000387	Tyrosine specific protein phosphatases domain
IPR014876	DEK, C-terminal
IPR016130	Protein-tyrosine phosphatase, active site
IPR020422	Dual specificity protein phosphatase domain
IPR024950	Dual specificity phosphatase
IPR027233	Protein phosphatase Slingshot homologue 1
IPR029021	Protein-tyrosine phosphatase-like

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006470	protein dephosphorylation	IEA
biological_process	GO:0008064	regulation of actin polymerization or depolymerization	IBA
biological_process	GO:0010591	regulation of lamellipodium assembly	IBA
biological_process	GO:0016311	dephosphorylation	IEA
biological_process	GO:0030036	actin cytoskeleton organization	IEA
biological_process	GO:0035335	peptidyl-tyrosine dephosphorylation	IEA
biological_process	GO:0050770	regulation of axonogenesis	IBA
cellular_component	GO:0005737	cytoplasm	IBA
molecular_function	GO:0003779	actin binding	IBA
molecular_function	GO:0004725	protein tyrosine phosphatase activity	IEA
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEA
molecular_function	GO:0016791	phosphatase activity	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr