ENSDARG00000059432


Danio rerio

Features
Gene ID: ENSDARG00000059432
  
Biological name :fsd1l
  
Synonyms : fibronectin type III and SPRY domain containing 1-like / fsd1l
  
Possible biological names infered from orthology : Mus musculus fibronectin type III and SPRY domain containing 1-like (Fsd1l), transcript variant 3, mRNA. / Q8BYN5 / Q9BXM9
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 69808763
Gene end: 69851412
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120509
swissprot - B8JMA4
ZFIN ID - ZDB-GENE-070501-9
Ensembl - ENSDARG00000059432
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FSD1LENSGALG00000015442Gallus gallus
 FSD1LENSG00000106701Homo sapiens
 Fsd1lENSMUSG00000054752Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fsd1 / Q1LY10 / fibronectin type III and SPRY domain containing 1 / Q9BTV5*ENSDARG0000006201752
mid1 / midline 1 / O15344* / O70583* / E3 ubiquitin-protein ligase Midline-1 *ENSDARG0000006048224
mid2 / midline 2 / Q9UJV3*ENSDARG0000003487122
trim9 / tripartite motif containing 9 / Q8C7M3* / Q9C026* / E3 ubiquitin-protein ligase TRIM9 *ENSDARG0000003912320
trim46a / tripartite motif containing 46a / TRIM46* / Q7TNM2* / Q7Z4K8* / tripartite motif containing 46*ENSDARG0000001236719
trim36 / tripartite motif containing 36 / Q80WG7* / Q9NQ86* / E3 ubiquitin-protein ligase Trim36 *ENSDARG0000006279419
TRIM67 / tripartite motif containing 67 / Q6ZTA4*ENSDARG0000010878718
trim46b / tripartite motif containing 46b / TRIM46* / Q7TNM2* / Q7Z4K8* / tripartite motif containing 46*ENSDARG0000005864917
trim55a / tripartite motif containing 55a / Q9BYV6* / TRIM55* / tripartite motif containing 55*ENSDARG000000295969
trim63b / tripartite motif containing 63b / Q969Q1* / TRIM63* / tripartite motif containing 63*ENSDARG000000866859
trim101 / tripartite motif containing 101ENSDARG000000182649
trim55b / tripartite motif containing 55b / Q9BYV6* / TRIM55* / tripartite motif containing 55*ENSDARG000000581588
trim63a / tripartite motif containing 63a / Q969Q1* / TRIM63* / tripartite motif containing 63*ENSDARG000000280278
trim54 / tripartite motif containing 54 / Q9BYV2* / Q9ERP3* / Tripartite motif-containing protein 54 *ENSDARG000000299077


Protein motifs (from Interpro)
Interpro ID Name
 IPR001870  B30.2/SPRY domain
 IPR003649  B-box, C-terminal
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR003961  Fibronectin type III
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR017903  COS domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr