ENSDARG00000069331


Danio rerio

Features
Gene ID: ENSDARG00000069331
  
Biological name :trip6
  
Synonyms : thyroid hormone receptor interactor 6 / trip6
  
Possible biological names infered from orthology : Q15654 / Q9Z1Y4
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 19978434
Gene end: 20021450
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142895
Ensembl peptide - ENSDARP00000150991
Ensembl peptide - ENSDARP00000149438
Ensembl peptide - ENSDARP00000091571
Ensembl peptide - ENSDARP00000142790
NCBI entrez gene - 792697     See in Manteia.
RefSeq - XM_005172226
RefSeq - XM_021471880
RefSeq - XM_021471881
RefSeq - XM_021471882
RefSeq - XM_021471883
RefSeq - XM_001922796
RefSeq - XM_005172225
RefSeq - XM_005172229
RefSeq - XM_009303106
RefSeq - XM_017357005
RefSeq - XM_021471878
RefSeq - XM_021471879
swissprot - E7F2R2
swissprot - A0A1D5NSS7
swissprot - A0A1D5NSH5
ZFIN ID - ZDB-GENE-140106-91
Ensembl - ENSDARG00000069331
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIP6ENSG00000087077Homo sapiens
 Trip6ENSMUSG00000023348Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lpp / LIM domain containing preferred translocation partner in lipoma / Q8BFW7* / Q93052* / Lipoma-preferred partner homolog *ENSDARG0000002357840
zyx / zyxin / Q15942* / Q62523*ENSDARG0000007573324
wtip / A8DZE6 / WT1 interacting protein / A6NIX2* / Q7TQJ8*ENSDARG0000010360721
ajuba / ajuba LIM protein / Q91XC0* / Q96IF1* / LIM domain-containing protein ajuba *ENSDARG0000007784218
fblim1 / filamin binding LIM protein 1 / Q71FD7* / Q8WUP2*ENSDARG0000007155814
ablim3 / actin binding LIM protein family, member 3 / O94929* / Q69ZX8*ENSDARG0000008816813
ablim1a / actin binding LIM protein 1a / ABLIM1* / O14639* / Q8K4G5* / actin binding LIM protein 1*ENSDARG0000006014912
CABZ01043952.1 / LIMD1* / Q9UGP4* / LIM domains containing 1*ENSDARG0000011095411
ablim2 / actin binding LIM protein family, member 2 / Q6H8Q1* / Q8BL65* / actin-binding LIM protein 2*ENSDARG0000005522311
ablim1b / actin binding LIM protein 1b / ABLIM1* / O14639* / Q8K4G5* / actin binding LIM protein 1*ENSDARG000000450649
BX465198.3 / DMTN* / Q08495* / dematin actin binding protein*ENSDARG000001164843
dmtn / dematin actin binding protein / Q08495* / Q9WV69* / Dematin *ENSDARG000000131103


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000155 somite somite U-shaped , abnormal
somite U-shaped , exacerbated
Show

 ZFA:0005145 muscle muscle disorganized , abnormal
muscle disorganized , exacerbated
Show

 ZFA:0009114 muscle cell muscle cell structure , abnormal
muscle cell structure , exacerbated
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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