ENSDARG00000045064


Danio rerio

Features
Gene ID: ENSDARG00000045064
  
Biological name :ablim1b
  
Synonyms : ablim1b / actin binding LIM protein 1b
  
Possible biological names infered from orthology : ABLIM1 / actin binding LIM protein 1 / O14639 / Q8K4G5
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 30046320
Gene end: 30220346
  
Corresponding Affymetrix probe sets: Dr.492.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000153503
Ensembl peptide - ENSDARP00000155018
Ensembl peptide - ENSDARP00000042571
Ensembl peptide - ENSDARP00000112634
Ensembl peptide - ENSDARP00000118444
Ensembl peptide - ENSDARP00000127129
Ensembl peptide - ENSDARP00000127435
NCBI entrez gene - 541550     See in Manteia.
RefSeq - NM_001014363
RefSeq - XM_021480081
RefSeq - XM_021480082
RefSeq - XM_021480084
RefSeq - XM_021480085
RefSeq Peptide - NP_001014385
swissprot - U3JB13
swissprot - U3JA64
swissprot - E9QIZ2
swissprot - F1REG0
swissprot - Q58EF7
ZFIN ID - ZDB-GENE-050327-91
Ensembl - ENSDARG00000045064
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABLIM1ENSGALG00000009048Gallus gallus
 ABLIM1ENSG00000099204Homo sapiens
 Ablim1ENSMUSG00000025085Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ablim1a / actin binding LIM protein 1a / ABLIM1* / O14639* / Q8K4G5* / actin binding LIM protein 1*ENSDARG0000006014980
ablim2 / actin binding LIM protein family, member 2 / Q6H8Q1* / Q8BL65* / actin-binding LIM protein 2*ENSDARG0000005522362
ablim3 / actin binding LIM protein family, member 3 / O94929* / Q69ZX8*ENSDARG0000008816859
BX465198.3 / DMTN* / Q08495* / dematin actin binding protein*ENSDARG0000011648415
lpp / LIM domain containing preferred translocation partner in lipoma / Q8BFW7* / Q93052* / Lipoma-preferred partner homolog *ENSDARG0000002357815
trip6 / thyroid hormone receptor interactor 6 / Q15654* / Q9Z1Y4*ENSDARG0000006933114
zyx / zyxin / Q15942* / Q62523*ENSDARG0000007573314
wtip / A8DZE6 / WT1 interacting protein / A6NIX2* / Q7TQJ8*ENSDARG0000010360712
fblim1 / filamin binding LIM protein 1 / Q71FD7* / Q8WUP2*ENSDARG0000007155812
ajuba / ajuba LIM protein / Q91XC0* / Q96IF1* / LIM domain-containing protein ajuba *ENSDARG0000007784212
dmtn / dematin actin binding protein / Q08495* / Q9WV69* / Dematin *ENSDARG000000131108
CABZ01043952.1 / LIMD1* / Q9UGP4* / LIM domains containing 1*ENSDARG000001109545


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR003128  Villin headpiece
 IPR032402  Putative adherens-junction anchoring domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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