ENSMUSG00000025085


Mus musculus

Features
Gene ID: ENSMUSG00000025085
  
Biological name :Ablim1
  
Synonyms : Ablim1 / actin-binding LIM protein 1 / Q8K4G5
  
Possible biological names infered from orthology : O14639
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: D2
Gene start: 57032733
Gene end: 57314919
  
Corresponding Affymetrix probe sets: 10468691 (MoGene1.0st)   1442376_at (Mouse Genome 430 2.0 Array)   1453103_at (Mouse Genome 430 2.0 Array)   1454708_at (Mouse Genome 430 2.0 Array)   1460120_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000107153
Ensembl peptide - ENSMUSP00000107151
Ensembl peptide - ENSMUSP00000107154
Ensembl peptide - ENSMUSP00000127818
Ensembl peptide - ENSMUSP00000117798
Ensembl peptide - ENSMUSP00000107184
Ensembl peptide - ENSMUSP00000107183
Ensembl peptide - ENSMUSP00000107180
Ensembl peptide - ENSMUSP00000107175
Ensembl peptide - ENSMUSP00000107172
Ensembl peptide - ENSMUSP00000107169
Ensembl peptide - ENSMUSP00000078336
Ensembl peptide - ENSMUSP00000096897
Ensembl peptide - ENSMUSP00000107149
NCBI entrez gene - 226251     See in Manteia.
MGI - MGI:1194500
RefSeq - XM_017318186
RefSeq - XM_006527039
RefSeq - XM_006527040
RefSeq - XM_006527041
RefSeq - XM_006527044
RefSeq - XM_006527048
RefSeq - XM_017318172
RefSeq - XM_017318173
RefSeq - XM_017318174
RefSeq - XM_017318175
RefSeq - XM_017318176
RefSeq - XM_017318177
RefSeq - XM_017318178
RefSeq - XM_017318179
RefSeq - XM_017318180
RefSeq - XM_017318181
RefSeq - XM_017318182
RefSeq - XM_017318183
RefSeq - XM_017318184
RefSeq - XM_017318185
RefSeq - NM_001103177
RefSeq - NM_001103178
RefSeq - NM_001290813
RefSeq - NM_001290815
RefSeq - NM_001290816
RefSeq - NM_001347459
RefSeq - NM_178688
RefSeq - XM_006527028
RefSeq - XM_006527033
RefSeq - XM_006527034
RefSeq - XM_006527035
RefSeq - XM_006527036
RefSeq - XM_006527037
RefSeq - XM_006527038
RefSeq Peptide - NP_001277745
RefSeq Peptide - NP_001334388
RefSeq Peptide - NP_848803
RefSeq Peptide - NP_001277742
RefSeq Peptide - NP_001277744
RefSeq Peptide - NP_001096647
RefSeq Peptide - NP_001096648
swissprot - E9Q9C1
swissprot - F6YHE5
swissprot - E9QK41
swissprot - Q8K4G5
swissprot - E9Q030
swissprot - E9Q9C0
swissprot - E9Q9Q7
swissprot - E9Q9D2
swissprot - E9Q9D1
swissprot - E9Q9C7
swissprot - E9Q9C4
swissprot - E9Q9C2
Ensembl - ENSMUSG00000025085
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ablim1aENSDARG00000060149Danio rerio
 ablim1bENSDARG00000045064Danio rerio
 ABLIM1ENSGALG00000009048Gallus gallus
 ABLIM1ENSG00000099204Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ablim2 / Q8BL65 / actin-binding LIM protein 2 / Q6H8Q1* / actin binding LIM protein family member 2*ENSMUSG0000002909543
Ablim3 / Q69ZX8 / actin binding LIM protein family, member 3 / O94929*ENSMUSG0000003273542
Dmtn / Q9WV69 / Dematin / Q08495* / dematin actin binding protein*ENSMUSG0000002209921
Trip6 / Q9Z1Y4 / thyroid hormone receptor interactor 6 / Q15654*ENSMUSG000000233489
Lpp / Q8BFW7 / Lipoma-preferred partner homolog / Q93052* / LIM domain containing preferred translocation partner in lipoma*ENSMUSG000000333069
Limd1 / Q9QXD8 / LIM domain-containing protein 1 / Q9UGP4* / LIM domains containing 1*ENSMUSG000000252399
Zyx / zyxin / Q62523 / Q15942*ENSMUSG000000298609
Ajuba / Q91XC0 / LIM domain-containing protein ajuba / Q96IF1* / ajuba LIM protein*ENSMUSG000000221789
Wtip / Q7TQJ8 / WT1-interacting protein / A6NIX2*ENSMUSG000000364598
Fblim1 / Q71FD7 / Filamin-binding LIM protein 1 / Q8WUP2*ENSMUSG000000062197


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR003128  Villin headpiece
 IPR028448  Actin-binding LIM protein 1
 IPR032402  Putative adherens-junction anchoring domain
 IPR036886  Villin headpiece domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007411 axon guidance IDA
 biological_processGO:0030032 lamellipodium assembly ISO
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0060271 cilium assembly ISO
 cellular_componentGO:0001725 stress fiber ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0014069 postsynaptic density IDA
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0030027 lamellipodium ISO
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Top3btm1Jcw/Top3b+
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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