ENSG00000099204


Homo sapiens

Features
Gene ID: ENSG00000099204
  
Biological name :ABLIM1
  
Synonyms : ABLIM1 / actin binding LIM protein 1 / O14639
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: q25.3
Gene start: 114431113
Gene end: 114685003
  
Corresponding Affymetrix probe sets: 200965_s_at (Human Genome U133 Plus 2.0 Array)   210461_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000414154
Ensembl peptide - ENSP00000400934
Ensembl peptide - ENSP00000433629
Ensembl peptide - ENSP00000277895
Ensembl peptide - ENSP00000358256
Ensembl peptide - ENSP00000358257
Ensembl peptide - ENSP00000358260
Ensembl peptide - ENSP00000358270
Ensembl peptide - ENSP00000376679
Ensembl peptide - ENSP00000376682
NCBI entrez gene - 3983     See in Manteia.
OMIM - 602330
RefSeq - XM_017016259
RefSeq - NM_002313
RefSeq - NM_006720
RefSeq - XM_005269824
RefSeq - XM_005269826
RefSeq - XM_005269827
RefSeq - XM_006717837
RefSeq - XM_006717846
RefSeq - XM_006717847
RefSeq - XM_011539801
RefSeq - XM_011539802
RefSeq - XM_011539803
RefSeq - XM_011539805
RefSeq - XM_017016242
RefSeq - XM_017016243
RefSeq - XM_017016244
RefSeq - XM_017016245
RefSeq - XM_017016246
RefSeq - XM_017016247
RefSeq - XM_017016248
RefSeq - XM_017016249
RefSeq - XM_017016250
RefSeq - XM_017016251
RefSeq - XM_017016252
RefSeq - XM_017016253
RefSeq - XM_017016254
RefSeq - XM_017016255
RefSeq - XM_017016256
RefSeq - XM_017016258
RefSeq - NM_001003407
RefSeq - NM_001003408
RefSeq - NM_001322882
RefSeq - NM_001322883
RefSeq - NM_001322884
RefSeq - NM_001322885
RefSeq - NM_001322886
RefSeq - NM_001322887
RefSeq - NM_001322888
RefSeq - NM_001322889
RefSeq - NM_001322890
RefSeq - NM_001322891
RefSeq - NM_001322892
RefSeq - NM_001322893
RefSeq - NM_001322894
RefSeq - NM_001322895
RefSeq - NM_001322896
RefSeq - NM_001322897
RefSeq - NM_001322898
RefSeq - NM_001322899
RefSeq - NM_001322900
RefSeq Peptide - NP_001003407
RefSeq Peptide - NP_001309826
RefSeq Peptide - NP_001309827
RefSeq Peptide - NP_001309828
RefSeq Peptide - NP_001309829
RefSeq Peptide - NP_002304
RefSeq Peptide - NP_006711
RefSeq Peptide - NP_001309811
RefSeq Peptide - NP_001309812
RefSeq Peptide - NP_001309813
RefSeq Peptide - NP_001309814
RefSeq Peptide - NP_001309815
RefSeq Peptide - NP_001309816
RefSeq Peptide - NP_001309817
RefSeq Peptide - NP_001309818
RefSeq Peptide - NP_001309819
RefSeq Peptide - NP_001309820
RefSeq Peptide - NP_001309821
RefSeq Peptide - NP_001309822
RefSeq Peptide - NP_001309823
RefSeq Peptide - NP_001309824
RefSeq Peptide - NP_001309825
swissprot - F8W8M4
swissprot - H0Y7N6
swissprot - J3QSX6
swissprot - O14639
swissprot - A0A0A0MRL6
swissprot - F6XFR5
Ensembl - ENSG00000099204
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ablim1aENSDARG00000060149Danio rerio
 ablim1bENSDARG00000045064Danio rerio
 ABLIM1ENSGALG00000009048Gallus gallus
 Ablim1ENSMUSG00000025085Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABLIM3 / O94929 / actin binding LIM protein family member 3ENSG0000017321047
ABLIM2 / Q6H8Q1 / actin binding LIM protein family member 2ENSG0000016399546
DMTN / Q08495 / dematin actin binding proteinENSG0000015885624
ZYX / zyxin / Q15942ENSG0000015984010
LIMD1 / Q9UGP4 / LIM domains containing 1ENSG0000014479110
TRIP6 / Q15654 / thyroid hormone receptor interactor 6ENSG0000008707710
LPP / Q93052 / LIM domain containing preferred translocation partner in lipomaENSG0000014501210
WTIP / A6NIX2 / WT1 interacting proteinENSG000001422799
AJUBA / Q96IF1 / ajuba LIM proteinENSG000001294749
FBLIM1 / Q8WUP2 / filamin binding LIM protein 1ENSG000001624586


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR003128  Villin headpiece
 IPR028448  Actin-binding LIM protein 1
 IPR032402  Putative adherens-junction anchoring domain
 IPR036886  Villin headpiece domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007601 visual perception TAS
 biological_processGO:0009887 animal organ morphogenesis TAS
 biological_processGO:0030032 lamellipodium assembly IMP
 biological_processGO:0060271 cilium assembly IMP
 cellular_componentGO:0001725 stress fiber IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0015629 actin cytoskeleton TAS
 cellular_componentGO:0030027 lamellipodium IDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
DCC mediated attractive signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000065320 NTN1 / O95631 / netrin 1  / complex / reaction
 ENSG00000010810 FYN / P06241 / FYN proto-oncogene, Src family tyrosine kinase  / complex / reaction
 ENSG00000158092 NCK1 / P16333 / NCK adaptor protein 1  / complex / reaction
 ENSG00000150760 DOCK1 / Q14185 / dedicator of cytokinesis 1  / reaction / complex
 ENSG00000187323 DCC / P43146 / DCC netrin 1 receptor  / complex / reaction
 ENSG00000038382 TRIO / O75962 / trio Rho guanine nucleotide exchange factor  / complex / reaction
 ENSG00000169398 PTK2 / Q05397 / protein tyrosine kinase 2  / reaction / complex
 ENSG00000136238 RAC1 / P63000 / Rac family small GTPase 1  / reaction / complex
 ENSG00000197122 SRC / P12931 / SRC proto-oncogene, non-receptor tyrosine kinase  / complex / reaction






 

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contact: otassy@igbmc.fr