ENSG00000187323


Homo sapiens

Features
Gene ID: ENSG00000187323
  
Biological name :DCC
  
Synonyms : DCC / DCC netrin 1 receptor / P43146
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: 1
Band: q21.2
Gene start: 52340172
Gene end: 53535903
  
Corresponding Affymetrix probe sets: 206939_at (Human Genome U133 Plus 2.0 Array)   238914_at (Human Genome U133 Plus 2.0 Array)   242653_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000464292
Ensembl peptide - ENSP00000464277
Ensembl peptide - ENSP00000464582
Ensembl peptide - ENSP00000304146
Ensembl peptide - ENSP00000389140
Ensembl peptide - ENSP00000397322
Ensembl peptide - ENSP00000463131
Ensembl peptide - ENSP00000463463
Ensembl peptide - ENSP00000463699
Ensembl peptide - ENSP00000463766
NCBI entrez gene - 1630     See in Manteia.
OMIM - 120470
RefSeq - XM_017025570
RefSeq - NM_005215
RefSeq - XM_011525843
RefSeq - XM_011525844
RefSeq - XM_017025568
RefSeq - XM_017025569
RefSeq Peptide - NP_005206
swissprot - J3QRM6
swissprot - J3QS93
swissprot - E7EQM8
swissprot - P43146
swissprot - H0Y2Q5
swissprot - J3QKL2
swissprot - J3QLB0
swissprot - J3QLT8
swissprot - J3QRL3
swissprot - J3QQJ6
Ensembl - ENSG00000187323
  
Related genetic diseases (OMIM): 114500 - Colorectal cancer, somatic, 114500
  133239 - Esophageal carcinoma, somatic, 133239
  157600 - Mirror movements 1 and/or agenesis of the corpus callosum, 157600
  617542 - Gaze palsy, familial horizontal, with progressive scoliosis, 2, 617542
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01088906.1ENSDARG00000104282Danio rerio
 DccENSMUSG00000060534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NEO1 / Q92859 / neogenin 1ENSG0000006714151
SDK1 / Q7Z5N4 / sidekick cell adhesion molecule 1ENSG0000014655524
SDK2 / Q58EX2 / sidekick cell adhesion molecule 2ENSG0000006918823
IGDCC4 / Q8TDY8 / immunoglobulin superfamily DCC subclass member 4ENSG0000010374222
DSCAM / O60469 / DS cell adhesion moleculeENSG0000017158721
Q8TD84 / DSCAML1 / DS cell adhesion molecule like 1ENSG0000017710321
PRTG / Q2VWP7 / protogeninENSG0000016645020
IGDCC3 / Q8IVU1 / immunoglobulin superfamily DCC subclass member 3ENSG0000017449814


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR010560  Neogenin, C-terminal
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR021157  Cytochrome c1, transmembrane anchor, C-terminal
 IPR033012  Netrin receptor DCC
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007409 axonogenesis TAS
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0010977 negative regulation of neuron projection development TAS
 biological_processGO:0021965 spinal cord ventral commissure morphogenesis IEA
 biological_processGO:0033563 dorsal/ventral axon guidance IEA
 biological_processGO:0033564 anterior/posterior axon guidance IEA
 biological_processGO:0038007 netrin-activated signaling pathway IEA
 biological_processGO:0048671 negative regulation of collateral sprouting TAS
 biological_processGO:0097192 extrinsic apoptotic signaling pathway in absence of ligand TAS
 biological_processGO:1901214 regulation of neuron death IMP
 biological_processGO:2000171 negative regulation of dendrite development TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030424 axon IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity TAS
 molecular_functionGO:0005042 netrin receptor activity IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Netrin-1 signaling
DSCAM interactions
DCC mediated attractive signaling
Netrin mediated repulsion signals
via Dependence Receptors in the absence of ligand
Role of second messengers in netrin-1 signaling
Regulation of commissural axon pathfinding by SLIT and ROBO


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000044 Hypogonadotrophic hypogonadism "Hypogonadotropic hypogonadism is characterized by reduced function of the gonads (testes in males or ovaries in females) and results from the absence of the gonadal stimulating pituitary hormones: follicle stimulating hormone (FSH) and luteinizing hormone (LH)." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000104 Renal agenesis 
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 HP:0000144 Decreased fertility 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000458 Anosmia "An inability to perceive odors. This is a general term describing inability to smell arising in any part of the process of smelling from absorption of odorants into the nasal mucous overlying the olfactory epithelium, diffusion to the cilia, binding to olfactory receptor sites, generation of action potentials in olfactory neurons, and perception of a smell." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000551 Abnormal color vision 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000771 Gynecomastia 
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 HP:0000786 Primary amenorrhea 
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 HP:0000823 Delayed puberty 
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 HP:0000830 Hypopituitarism "A condition of reduced function of the pituitary gland characterized by decreased secretion of one or more of the eight pituitary hormones." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001328 Learning disability 
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 HP:0001335 Mirror hand movements (bimanual synkinesia) 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0001608 Abnormality of the voice "Any abnormality of the voice." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0002312 Clumsiness 
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 HP:0002492 Abnormality of the corticospinal tract "Abnormality of the corticospinal tract, which is the chief element of the pyramidal system (the principle motor tract) and is the only direct connection between the cerebrum and the spinal cord." [HPO:curators]
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 HP:0002652 Skeletal dysplasia 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002860 Squamous cell carcinoma 
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 HP:0002891 Uterine leiomyosarcoma 
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 HP:0002949 Fused cervical vertebrae 
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 HP:0003164 Hypothalamic gonadotropin-releasing hormone (GNRH) deficiency 
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 HP:0003187 Breast hypoplasia 
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003388 Easy fatigability 
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 HP:0003829 Incomplete penetrance 
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 HP:0004349 Reduced bone mineral density "A reduction of bone mineral density, that is, of the amount of matter per cubic centimeter of bones." [HPO:curators]
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 HP:0004409 Hyposmia "A decreased sensitivity to odorants (that is, a decreased ability to perceive odors)." [HPO:curators]
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 HP:0005584 Renal cell carcinoma "Renal cell carcinoma (also known as hypernephroma) is the most common form of kidney cancer arising from the proximal renal tubule. The tissue of origin for renal cell carcinoma is the proximal renal tubular epithelium. Renal cell carcinoma can be classified as 1) clear cell carcinoma, 2) papillary carcinoma, 3) chromophobe renal carcinoma, and 4) collecting duct carcinoma." [HPO:curators]
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 HP:0006716 Hereditary nonpolyposis colorectal carcinoma 
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 HP:0006740 Transitional cell carcinoma of the bladder 
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 HP:0006753 Increased gastric cancer 
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 HP:0007010 Poor fine motor coordination 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008734 Decreased testicular size 
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 HP:0009804 Reduced number of teeth 
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 HP:0010550 Paraplegia "Severe or complete weakness of both lower extremities with sparing of the upper extremities." [HPO:curators]
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 HP:0025101 Dysgenesis of the hippocampus "Structural abnormality of the hippocampus related to defective development." []
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 HP:0030016 Dyspareunia "Recurrent or persistent genital pain associated with sexual intercourse." []
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0100021 Cerebral paralysis "Cerebral palsy describes a group of permanent disorders of the development of movement and posture, causing activity limitation, that are attributed to nonprogressive disturbances that occurred in the developing fetal or infant brain. The motor disorders of cerebral palsy are often accompanied by disturbances of sensation, perception, cognition, communication, and behaviour, by epilepsy, and by secondary musculoskeletal problems." [HPO:sdoelken]
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 HP:0100639 Erectile abnormalities 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000065320 NTN1 / O95631 / netrin 1  / reaction / complex
 ENSG00000010810 FYN / P06241 / FYN proto-oncogene, Src family tyrosine kinase  / reaction / complex
 ENSG00000106299 WASL / O00401 / Wiskott-Aldrich syndrome like  / complex / reaction
 ENSG00000157500 APPL1 / Q9UKG1 / adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1  / reaction / complex
 ENSG00000092820 EZR / ezrin / P15311  / reaction / complex
 ENSG00000038382 TRIO / O75962 / trio Rho guanine nucleotide exchange factor  / complex / reaction
 ENSG00000099204 ABLIM1 / O14639 / actin binding LIM protein 1  / complex / reaction
 ENSG00000107731 UNC5B / Q8IZJ1 / unc-5 netrin receptor B  / complex / reaction
 ENSG00000113763 UNC5A / Q6ZN44 / unc-5 netrin receptor A  / reaction / complex
 ENSG00000173210 ABLIM3 / O94929 / actin binding LIM protein family member 3  / complex / reaction
 ENSG00000184347 SLIT3 / O75094 / slit guidance ligand 3  / reaction / complex
 ENSG00000150760 DOCK1 / Q14185 / dedicator of cytokinesis 1  / reaction / complex
 ENSG00000074527 NTN4 / Q9HB63 / netrin 4  / reaction / complex
 ENSG00000182168 UNC5C / O95185 / unc-5 netrin receptor C  / complex / reaction
 ENSG00000136238 RAC1 / P63000 / Rac family small GTPase 1  / complex / reaction
 ENSG00000154134 ROBO3 / Q96MS0 / roundabout guidance receptor 3  / complex / reaction
 ENSG00000169398 PTK2 / Q05397 / protein tyrosine kinase 2  / complex / reaction
 ENSG00000158092 NCK1 / P16333 / NCK adaptor protein 1  / reaction / complex
 ENSG00000145147 SLIT2 / O94813 / slit guidance ligand 2  / reaction / complex
 ENSG00000181788 SIAH2 / O43255 / siah E3 ubiquitin protein ligase 2  / reaction / complex
 ENSG00000163995 ABLIM2 / Q6H8Q1 / actin binding LIM protein family member 2  / reaction / complex
 ENSG00000196470 SIAH1 / Q8IUQ4 / siah E3 ubiquitin protein ligase 1  / complex / reaction
 ENSG00000174238 PITPNA / Q00169 / phosphatidylinositol transfer protein alpha  / reaction / complex
 ENSG00000169855 ROBO1 / Q9Y6N7 / roundabout guidance receptor 1  / complex / reaction
 ENSG00000187323 DCC / P43146 / DCC netrin 1 receptor  / complex / reaction
 ENSG00000070831 CDC42 / P60953 / cell division cycle 42  / reaction / complex
 ENSG00000187122 SLIT1 / O75093 / slit guidance ligand 1  / reaction / complex
 ENSG00000156687 UNC5D / Q6UXZ4 / unc-5 netrin receptor D  / reaction / complex
 ENSG00000179295 PTPN11 / Q06124 / protein tyrosine phosphatase, non-receptor type 11  / reaction / complex
 ENSG00000132906 CASP9 / P55211 / caspase 9  / reaction / complex
 ENSG00000164305 CASP3 / P42574 / caspase 3  / reaction
 ENSG00000145555 MYO10 / Q9HD67 / myosin X  / reaction / complex
 ENSG00000197122 SRC / P12931 / SRC proto-oncogene, non-receptor tyrosine kinase  / reaction / complex
 ENSG00000171587 DSCAM / O60469 / DS cell adhesion molecule  / complex / reaction






 

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