ENSDARG00000060149


Danio rerio

Features
Gene ID: ENSDARG00000060149
  
Biological name :ablim1a
  
Synonyms : ablim1a / actin binding LIM protein 1a
  
Possible biological names infered from orthology : ABLIM1 / actin binding LIM protein 1 / O14639 / Q8K4G5
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 43507383
Gene end: 43599939
  
Corresponding Affymetrix probe sets: Dr.26033.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000078851
Ensembl peptide - ENSDARP00000115616
NCBI entrez gene - 100003558     See in Manteia.
RefSeq - NM_001114316
RefSeq Peptide - NP_001107788
swissprot - F1Q5C0
swissprot - B8A6I5
ZFIN ID - ZDB-GENE-080219-41
Ensembl - ENSDARG00000060149
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABLIM1ENSGALG00000009048Gallus gallus
 ABLIM1ENSG00000099204Homo sapiens
 Ablim1ENSMUSG00000025085Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ablim3 / actin binding LIM protein family, member 3 / O94929* / Q69ZX8*ENSDARG0000008816849
ablim2 / actin binding LIM protein family, member 2 / Q6H8Q1* / Q8BL65* / actin-binding LIM protein 2*ENSDARG0000005522346
ablim1b / actin binding LIM protein 1b / ABLIM1* / O14639* / Q8K4G5* / actin binding LIM protein 1*ENSDARG0000004506441
dmtn / dematin actin binding protein / Q08495* / Q9WV69* / Dematin *ENSDARG0000001311021
trip6 / thyroid hormone receptor interactor 6 / Q15654* / Q9Z1Y4*ENSDARG0000006933110
lpp / LIM domain containing preferred translocation partner in lipoma / Q8BFW7* / Q93052* / Lipoma-preferred partner homolog *ENSDARG0000002357810
wtip / A8DZE6 / WT1 interacting protein / A6NIX2* / Q7TQJ8*ENSDARG0000010360710
zyx / zyxin / Q15942* / Q62523*ENSDARG000000757339
ajuba / ajuba LIM protein / Q91XC0* / Q96IF1* / LIM domain-containing protein ajuba *ENSDARG000000778428
fblim1 / filamin binding LIM protein 1 / Q71FD7* / Q8WUP2*ENSDARG000000715588
BX465198.3 / DMTN* / Q08495* / dematin actin binding protein*ENSDARG000001164847
CABZ01043952.1 / LIMD1* / Q9UGP4* / LIM domains containing 1*ENSDARG000001109544


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR003128  Villin headpiece
 IPR028448  Actin-binding LIM protein 1
 IPR032402  Putative adherens-junction anchoring domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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