ENSDARG00000023578


Danio rerio

Features
Gene ID: ENSDARG00000023578
  
Biological name :lpp
  
Synonyms : LIM domain containing preferred translocation partner in lipoma / lpp
  
Possible biological names infered from orthology : Lipoma-preferred partner homolog / Q8BFW7 / Q93052
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 28294113
Gene end: 28690670
  
Corresponding Affymetrix probe sets: Dr.14311.1.S1_at (Zebrafish Array)   Dr.7123.1.A1_at (Zebrafish Array)   Dr.8672.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113831
Ensembl peptide - ENSDARP00000145164
swissprot - F1QSX8
ZFIN ID - ZDB-GENE-040426-918
Ensembl - ENSDARG00000023578
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LPPENSGALG00000007337Gallus gallus
 LPPENSG00000145012Homo sapiens
 LppENSMUSG00000033306Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trip6 / thyroid hormone receptor interactor 6 / Q15654* / Q9Z1Y4*ENSDARG0000006933142
zyx / zyxin / Q15942* / Q62523*ENSDARG0000007573329
wtip / A8DZE6 / WT1 interacting protein / A6NIX2* / Q7TQJ8*ENSDARG0000010360723
ajuba / ajuba LIM protein / Q91XC0* / Q96IF1* / LIM domain-containing protein ajuba *ENSDARG0000007784221
ablim3 / actin binding LIM protein family, member 3 / O94929* / Q69ZX8*ENSDARG0000008816813
fblim1 / filamin binding LIM protein 1 / Q71FD7* / Q8WUP2*ENSDARG0000007155813
ablim2 / actin binding LIM protein family, member 2 / Q6H8Q1* / Q8BL65* / actin-binding LIM protein 2*ENSDARG0000005522313
ablim1a / actin binding LIM protein 1a / ABLIM1* / O14639* / Q8K4G5* / actin binding LIM protein 1*ENSDARG0000006014912
CABZ01043952.1 / LIMD1* / Q9UGP4* / LIM domains containing 1*ENSDARG0000011095411
ablim1b / actin binding LIM protein 1b / ABLIM1* / O14639* / Q8K4G5* / actin binding LIM protein 1*ENSDARG0000004506410
dmtn / dematin actin binding protein / Q08495* / Q9WV69* / Dematin *ENSDARG000000131104
BX465198.3 / DMTN* / Q08495* / dematin actin binding protein*ENSDARG000001164843


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR028771  Lipoma-preferred partner


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060027 convergent extension involved in gastrulation IMP
 biological_processGO:0060030 dorsal convergence IMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000155 somite somite increased width , abnormal
somite condensed , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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