ENSMUSG00000033306


Mus musculus

Features
Gene ID: ENSMUSG00000033306
  
Biological name :Lpp
  
Synonyms : Lipoma-preferred partner homolog / Lpp / Q8BFW7
  
Possible biological names infered from orthology : LIM domain containing preferred translocation partner in lipoma / Q93052
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: B1
Gene start: 24393350
Gene end: 24992576
  
Corresponding Affymetrix probe sets: 10434782 (MoGene1.0st)   10434806 (MoGene1.0st)   1425673_at (Mouse Genome 430 2.0 Array)   1436714_at (Mouse Genome 430 2.0 Array)   1437235_x_at (Mouse Genome 430 2.0 Array)   1438271_at (Mouse Genome 430 2.0 Array)   1440167_s_at (Mouse Genome 430 2.0 Array)   1446698_at (Mouse Genome 430 2.0 Array)   1454899_at (Mouse Genome 430 2.0 Array)   1455314_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000036304
Ensembl peptide - ENSMUSP00000078005
Ensembl peptide - ENSMUSP00000110969
NCBI entrez gene - 210126     See in Manteia.
MGI - MGI:2441849
RefSeq - XM_017316922
RefSeq - NM_001145952
RefSeq - NM_001145954
RefSeq - NM_178665
RefSeq - XM_006521957
RefSeq Peptide - NP_848780
RefSeq Peptide - NP_001139424
RefSeq Peptide - NP_001139426
swissprot - Q8BFW7
Ensembl - ENSMUSG00000033306
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lppENSDARG00000023578Danio rerio
 LPPENSGALG00000007337Gallus gallus
 LPPENSG00000145012Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Trip6 / Q9Z1Y4 / thyroid hormone receptor interactor 6 / Q15654*ENSMUSG0000002334841
Zyx / zyxin / Q62523 / Q15942*ENSMUSG0000002986035
Limd1 / Q9QXD8 / LIM domain-containing protein 1 / Q9UGP4* / LIM domains containing 1*ENSMUSG0000002523924
Wtip / Q7TQJ8 / WT1-interacting protein / A6NIX2*ENSMUSG0000003645920
Ajuba / Q91XC0 / LIM domain-containing protein ajuba / Q96IF1* / ajuba LIM protein*ENSMUSG0000002217820
Fblim1 / Q71FD7 / Filamin-binding LIM protein 1 / Q8WUP2*ENSMUSG0000000621919
Ablim2 / Q8BL65 / actin-binding LIM protein 2 / Q6H8Q1* / actin binding LIM protein family member 2*ENSMUSG0000002909513
Ablim1 / Q8K4G5 / actin-binding LIM protein 1 / O14639*ENSMUSG0000002508513
Ablim3 / Q69ZX8 / actin binding LIM protein family, member 3 / O94929*ENSMUSG0000003273512
Dmtn / Q9WV69 / Dematin / Q08495* / dematin actin binding protein*ENSMUSG000000220994


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR028771  Lipoma-preferred partner


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000313 abnormal cell death "anomalous cessation of function at the cellular level" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Gria1tm1Erk/Gria1tm1Erk
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0001792 impaired wound healing "reduced ability or inability to self-repair and close wounds" [J:65302, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Gria1tm1Erk/Gria1tm1Erk
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0001923 reduced female fertility "reduced ability of female to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
Show

Allelic Composition: Gria1tm1Erk/Gria1tm1Erk
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0011090 partial perinatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
Show

Allelic Composition: Gria1tm1Erk/Gria1tm1Erk
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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