ENSGALG00000009048


Gallus gallus

Features
Gene ID: ENSGALG00000009048
  
Biological name :ABLIM1
  
Synonyms : ABLIM1 / actin-binding LIM protein 1
  
Possible biological names infered from orthology : O14639 / Q8K4G5
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 27848491
Gene end: 28021075
  
Corresponding Affymetrix probe sets: Gga.13884.1.S1_s_at (Chicken Array)   Gga.16347.1.S1_s_at (Chicken Array)   Gga.18159.1.S1_at (Chicken Array)   Gga.18159.1.S1_s_at (Chicken Array)   GgaAffx.21606.1.S1_at (Chicken Array)   GgaAffx.22790.1.S1_s_at (Chicken Array)   GgaAffx.22790.2.S1_at (Chicken Array)   GgaAffx.22790.3.S1_at (Chicken Array)   GgaAffx.22790.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014715
NCBI entrez gene - 423911     See in Manteia.
RefSeq - XM_015288674
RefSeq - NM_001159363
RefSeq - XM_015288672
RefSeq - XM_015288673
RefSeq - XM_015288660
RefSeq - XM_015288661
RefSeq - XM_015288662
RefSeq - XM_015288663
RefSeq - XM_015288664
RefSeq - XM_015288665
RefSeq - XM_015288666
RefSeq - XM_015288667
RefSeq - XM_015288669
RefSeq - XM_015288670
RefSeq - XM_015288671
RefSeq Peptide - NP_001152835
swissprot - E1BS96
Ensembl - ENSGALG00000009048
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ablim1aENSDARG00000060149Danio rerio
 ablim1bENSDARG00000045064Danio rerio
 ABLIM1ENSG00000099204Homo sapiens
 Ablim1ENSMUSG00000025085Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABLIM2 / actin binding LIM protein family member 2 / Q6H8Q1* / Q8BL65* / actin-binding LIM protein 2*ENSGALG0000004344846
ABLIM3 / actin binding LIM protein family member 3 / O94929* / Q69ZX8*ENSGALG0000000279046
LPP / Q5F464 / Lipoma-preferred partner homolog / Q8BFW7* / Q93052* / LIM domain containing preferred translocation partner in lipoma*ENSGALG0000000733711
WTIP / WT1 interacting protein / A6NIX2* / Q7TQJ8*ENSGALG0000002586410
ZYX / Q04584 / Zyxin / Q15942* / Q62523*ENSGALG000000146889
LIMD1 / LIM domains containing 1 / Q9QXD8* / Q9UGP4* / LIM domain-containing protein 1 *ENSGALG000000356237
FBLIM1 / filamin binding LIM protein 1 / Q71FD7* / Q8WUP2*ENSGALG000000036367


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR003128  Villin headpiece
 IPR028448  Actin-binding LIM protein 1
 IPR032402  Putative adherens-junction anchoring domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0030032 lamellipodium assembly IEA
 biological_processGO:0060271 cilium assembly IEA
 cellular_componentGO:0001725 stress fiber IEA
 cellular_componentGO:0030027 lamellipodium IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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