ENSDARG00000073724


Danio rerio

Features
Gene ID: ENSDARG00000073724
  
Biological name :nlrx1
  
Synonyms : NLR family member X1 / nlrx1
  
Possible biological names infered from orthology : Q3TL44 / Q86UT6
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 23468025
Gene end: 23485752
  
Corresponding Affymetrix probe sets: Dr.18589.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000154296
Ensembl peptide - ENSDARP00000156516
Ensembl peptide - ENSDARP00000126611
Ensembl peptide - ENSDARP00000126680
NCBI entrez gene - 557335     See in Manteia.
RefSeq - XM_021466414
RefSeq - XM_680389
swissprot - E7FDW7
swissprot - R4GDQ6
ZFIN ID - ZDB-GENE-071119-3
Ensembl - ENSDARG00000073724
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NLRX1ENSGALG00000044053Gallus gallus
 NLRX1ENSG00000160703Homo sapiens
 Nlrx1ENSMUSG00000032109Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-156p11.1ENSDARG0000007160418
si:ch211-196h16.4ENSDARG0000009478218
si:dkey-121n8.7ENSDARG0000009406718
si:dkey-230i18.2ENSDARG0000009353218
si:zfos-364h11.1 / si:zfos-364h11.2ENSDARG0000009094618
nlrc8 / NLR family CARD domain containing 8ENSDARG0000007681918
si:ch211-250k18.7ENSDARG0000009376118
si:ch211-250k18.5ENSDARG0000006874917
si:dkey-29j8.1ENSDARG0000010127217
si:dkey-126g1.7ENSDARG0000008670317
si:ch211-237a4.2 / si:ch211-79g12.2ENSDARG0000010011017
nlrc9 / NLR family CARD domain containing 9ENSDARG0000007810117
si:ch211-233m11.1ENSDARG0000007465317
nlrc6 / NLR family CARD domain containing 6ENSDARG0000009132017
si:dkey-41c6.3ENSDARG0000010447617
si:dkey-261j11.2ENSDARG0000010155117
si:ch211-205a14.7ENSDARG0000010222517
si:dkeyp-4f2.1ENSDARG0000008930417
si:ch211-22k7.9ENSDARG0000008778817
si:ch211-227e10.6ENSDARG0000010221517


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR007111  NACHT nucleoside triphosphatase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Negative regulators of DDX58/IFIH1 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000069733 mavs / mitochondrial antiviral signaling protein / Q7Z434* / Q8VCF0*  / complex / reaction






 

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contact: otassy@igbmc.fr