ENSDARG00000075116


Danio rerio

Features
Gene ID: ENSDARG00000075116
  
Biological name :sall2
  
Synonyms : sall2 / spalt-like transcription factor 2
  
Possible biological names infered from orthology : Q9QX96 / Q9Y467 / Sal-like protein 2
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 38147761
Gene end: 38157339
  
Corresponding Affymetrix probe sets: Dr.3185.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113388
Ensembl peptide - ENSDARP00000148781
swissprot - F1RAH4
ZFIN ID - ZDB-GENE-030829-32
Ensembl - ENSDARG00000075116
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SALL2ENSG00000165821Homo sapiens
 Sall2ENSMUSG00000049532Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-212k18.5 / SALL2* / Q9Y467* / Q9QX96* / Sal-like protein 2 * / spalt like transcription factor 2*ENSDARG0000010331637
sall1a / spalt-like transcription factor 1a / SALL1* / Q9NSC2* / spalt like transcription factor 1*ENSDARG0000007431916
sall3a / spalt-like transcription factor 3a / SALL3* / Q9BXA9* / Q62255* / Sal-like protein 3 * / spalt like transcription factor 3*ENSDARG0000007961316
sall3b / spalt-like transcription factor 3b / SALL3* / Q9BXA9* / Q62255* / Sal-like protein 3 * / spalt like transcription factor 3*ENSDARG0000005758615
sall1b / spalt-like transcription factor 1bENSDARG0000007589115
sall4 / spalt-like transcription factor 4 / Q9UJQ4*ENSDARG0000004448515


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0007275 multicellular organism development IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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