ENSDARG00000103316


Danio rerio

Features
Gene ID: ENSDARG00000103316
  
Biological name :si:ch211-212k18.5
  
Synonyms : si:ch211-212k18.5
  
Possible biological names infered from orthology : Q9QX96 / Q9Y467 / SALL2 / Sal-like protein 2 / spalt like transcription factor 2
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 19552381
Gene end: 19558842
  
Corresponding Affymetrix probe sets: Dr.26390.1.A1_at (Zebrafish Array)   Dr.26403.2.S1_at (Zebrafish Array)   Dr.4941.1.S1_at (Zebrafish Array)   Dr.5095.1.A1_at (Zebrafish Array)   XM_686268_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000130030
NCBI entrez gene - 562900     See in Manteia.
RefSeq - XM_021477752
RefSeq - XM_686268
swissprot - A0A0R4I9L7
ZFIN ID - ZDB-GENE-030131-379
Ensembl - ENSDARG00000103316
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SALL2ENSG00000165821Homo sapiens
 Sall2ENSMUSG00000049532Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sall2 / spalt-like transcription factor 2 / Q9QX96* / Q9Y467* / Sal-like protein 2 *ENSDARG0000007511640
sall1a / spalt-like transcription factor 1a / SALL1* / Q9NSC2* / spalt like transcription factor 1*ENSDARG0000007431918
sall3a / spalt-like transcription factor 3a / SALL3* / Q9BXA9* / Q62255* / Sal-like protein 3 * / spalt like transcription factor 3*ENSDARG0000007961317
sall3b / spalt-like transcription factor 3b / SALL3* / Q9BXA9* / Q62255* / Sal-like protein 3 * / spalt like transcription factor 3*ENSDARG0000005758616
sall1b / spalt-like transcription factor 1bENSDARG0000007589116
sall4 / spalt-like transcription factor 4 / Q9UJQ4*ENSDARG0000004448515


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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