ENSDARG00000057586


Danio rerio

Features
Gene ID: ENSDARG00000057586
  
Biological name :sall3b
  
Synonyms : sall3b / spalt-like transcription factor 3b
  
Possible biological names infered from orthology : Q62255 / Q9BXA9 / SALL3 / Sal-like protein 3 / spalt like transcription factor 3
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 22062202
Gene end: 22074081
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000090954
NCBI entrez gene - 568041     See in Manteia.
swissprot - Q1LVB0
ZFIN ID - ZDB-GENE-030131-9140
Ensembl - ENSDARG00000057586
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SALL3ENSGALG00000041404Gallus gallus
 SALL3ENSG00000256463Homo sapiens
 Sall3ENSMUSG00000024565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sall3a / spalt-like transcription factor 3a / SALL3* / Q9BXA9* / Q62255* / Sal-like protein 3 * / spalt like transcription factor 3*ENSDARG0000007961354
sall1a / spalt-like transcription factor 1a / SALL1* / Q9NSC2* / spalt like transcription factor 1*ENSDARG0000007431941
sall1b / spalt-like transcription factor 1bENSDARG0000007589135
sall4 / spalt-like transcription factor 4 / Q9UJQ4*ENSDARG0000004448533
sall2 / spalt-like transcription factor 2 / Q9QX96* / Q9Y467* / Sal-like protein 2 *ENSDARG0000007511616
si:ch211-212k18.5 / SALL2* / Q9Y467* / Q9QX96* / Sal-like protein 2 * / spalt like transcription factor 2*ENSDARG0000010331615


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr