ENSDARG00000079613


Danio rerio

Features
Gene ID: ENSDARG00000079613
  
Biological name :sall3a
  
Synonyms : sall3a / spalt-like transcription factor 3a
  
Possible biological names infered from orthology : Q62255 / Q9BXA9 / SALL3 / Sal-like protein 3 / spalt like transcription factor 3
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 6632969
Gene end: 6654587
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000104082
NCBI entrez gene - 560775     See in Manteia.
swissprot - F1R6E0
ZFIN ID - ZDB-GENE-020228-4
Ensembl - ENSDARG00000079613
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SALL3ENSGALG00000041404Gallus gallus
 SALL3ENSG00000256463Homo sapiens
 Sall3ENSMUSG00000024565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sall3b / spalt-like transcription factor 3b / SALL3* / Q9BXA9* / Q62255* / Sal-like protein 3 * / spalt like transcription factor 3*ENSDARG0000005758651
sall1a / spalt-like transcription factor 1a / SALL1* / Q9NSC2* / spalt like transcription factor 1*ENSDARG0000007431942
sall4 / spalt-like transcription factor 4 / Q9UJQ4*ENSDARG0000004448535
sall1b / spalt-like transcription factor 1bENSDARG0000007589135
sall2 / spalt-like transcription factor 2 / Q9QX96* / Q9Y467* / Sal-like protein 2 *ENSDARG0000007511616
si:ch211-212k18.5 / SALL2* / Q9Y467* / Q9QX96* / Sal-like protein 2 * / spalt like transcription factor 2*ENSDARG0000010331615


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0022008 neurogenesis IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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