ENSDARG00000076389


Danio rerio

Features
Gene ID: ENSDARG00000076389
  
Biological name :si:dkey-217f16.6
  
Synonyms : si:dkey-217f16.6
  
Possible biological names infered from orthology : Q8BKI2 / Q9UPQ9 / TNRC6B / trinucleotide repeat containing 6B
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 2602341
Gene end: 2623176
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122462
Ensembl peptide - ENSDARP00000111218
Ensembl peptide - ENSDARP00000150887
NCBI entrez gene - 101882473     See in Manteia.
swissprot - E7F339
swissprot - F1QRP4
ZFIN ID - ZDB-GENE-091117-15
Ensembl - ENSDARG00000076389
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000012050Gallus gallus
 Q9UPQ9ENSG00000100354Homo sapiens
 Q8BKI2ENSMUSG00000047888Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-46g23.1 / Q8BKI2* / Q9UPQ9* / TNRC6B* / trinucleotide repeat containing 6B*ENSDARG00000079723100
tnrc6b / trinucleotide repeat containing 6b / Q8BKI2* / Q9UPQ9*ENSDARG0000007416157
tnrc6c1 / trinucleotide repeat containing 6C1 / Q9HCJ0* / TNRC6C* / trinucleotide repeat containing 6C*ENSDARG0000007684735
tnrc6c2 / trinucleotide repeat containing 6C2 / Q9HCJ0* / TNRC6C* / trinucleotide repeat containing 6C*ENSDARG0000010385134
tnrc6a / trinucleotide repeat containing 6a / Q8NDV7*ENSDARG0000007968833


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR032226  TNRC6, PABC binding domain
 IPR033500  Trinucleotide repeat-containing gene 6B protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035278 miRNA mediated inhibition of translation IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
Post-transcriptional silencing by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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