ENSDARG00000076856


Danio rerio

Features
Gene ID: ENSDARG00000076856
  
Biological name :frem2a
  
Synonyms : Fras1 related extracellular matrix protein 2a / frem2a
  
Possible biological names infered from orthology : FRAS1 related extracellular matrix protein 2 / FREM2 / Q5SZK8 / Q6NVD0
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 25982212
Gene end: 26116636
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102786
Ensembl peptide - ENSDARP00000106284
NCBI entrez gene - 555681     See in Manteia.
swissprot - B6IDE6
swissprot - D7PS91
ZFIN ID - ZDB-GENE-081119-3
Ensembl - ENSDARG00000076856
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FREM2ENSGALG00000033671Gallus gallus
 FREM2ENSG00000150893Homo sapiens
 Frem2ENSMUSG00000037016Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
frem2b / Fras1 related extracellular matrix protein 2b / FREM2* / Q5SZK8* / Q6NVD0* / FRAS1 related extracellular matrix protein 2*ENSDARG0000010262675
frem3 / Fras1 related extracellular matrix 3 / P0C091*ENSDARG0000007467768
fras1 / Fraser extracellular matrix complex subunit 1 / Q80T14* / Q86XX4* / Extracellular matrix protein FRAS1 *ENSDARG0000005461930
frem1a / Fras1 related extracellular matrix 1a / FREM1* / Q5H8C1* / FRAS1 related extracellular matrix 1*ENSDARG0000006947320
frem1b / Fras1 related extracellular matrix 1bENSDARG0000006240220
si:dkey-193c22.2 / BC067074* / cDNA sequence BC067074*ENSDARG0000007673514
cspg4 / chondroitin sulfate proteoglycan 4 / Q6UVK1* / Q8VHY0*ENSDARG0000007822713
si:dkeyp-41f9.3 / BC067074* / cDNA sequence BC067074*ENSDARG000000756006


Protein motifs (from Interpro)
Interpro ID Name
 IPR003644  Na-Ca exchanger/integrin-beta4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 biological_processGO:0033333 fin development IMP
 biological_processGO:0033334 fin morphogenesis IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000040 median fin fold median fin fold blistered , abnormal
median fin fold edematous , abnormal
median fin fold degenerate , abnormal
median fin fold epidermis morphology , abnormal
Show

 ZFA:0000108 fin fin degenerate , abnormal
fin malformed , abnormal
Show

 ZFA:0000292 surface structure surface structure quality , abnormal
Show

 ZFA:0001058 caudal fin caudal fin has fewer parts of type lepidotrichium , abnormal
Show

 ZFA:0001069 ventral fin fold ventral fin fold edematous , abnormal
ventral fin fold epidermis morphology , abnormal
Show

 ZFA:0001161 pectoral fin pectoral fin has fewer parts of type lepidotrichium , abnormal
pectoral fin degenerate , abnormal
pectoral fin edematous , abnormal
Show

 ZFA:0001162 anal fin anal fin increased length , abnormal
Show

 ZFA:0001173 dorsal fin dorsal fin has fewer parts of type lepidotrichium , abnormal
Show

 ZFA:0009090 pigment cell pigment cell irregular spatial pattern , abnormal
Show

 ZFA:0009091 melanocyte melanocyte quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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