ENSDARG00000086060


Danio rerio

Features
Gene ID: ENSDARG00000086060
  
Biological name :hmcn2
  
Synonyms : hemicentin 2 / hmcn2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 32613680
Gene end: 32666257
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109565
swissprot - E7EY71
ZFIN ID - ZDB-GENE-030131-9765
Ensembl - ENSDARG00000086060
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000034892Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hmcn2 / hemicentin 2 / A2AJ76* / Q8NDA2*ENSDARG00000079327100
hmcn1 / hemicentin 1 / D3YXG0* / Q96RW7*ENSDARG0000001693652
ttn.1 / titin, tandem duplicate 1 / TTN* / titin* / A2ASS6* / Q8WZ42*ENSDARG0000000056314
ttn.2 / titin, tandem duplicate 2 / TTN* / titin* / A2ASS6* / Q8WZ42*ENSDARG0000002821313
obsl1a / obscurin-like 1a / OBSL1* / O75147* / obscurin like 1*ENSDARG0000000368412
obsl1b / obscurin-like 1b / OBSL1* / D3YYU8* / O75147* / obscurin like 1* / Obscurin-like protein 1 *ENSDARG0000007738812
mxra5b / matrix-remodelling associated 5b / MXRA5* / Q9NR99* / matrix remodeling associated 5*ENSDARG000000763098
si:ch211-159i8.4ENSDARG000000763327
mxra5a / matrix-remodelling associated 5a / MXRA5* / Q9NR99* / matrix remodeling associated 5*ENSDARG000000748157
igsf10 / immunoglobulin superfamily, member 10 / Q3V1M1* / Q6WRI0*ENSDARG000000774977
palld / palladin, cytoskeletal associated protein / Q8WX93* / Q9ET54* / Palladin *ENSDARG000000400091
CU928131.1ENSDARG000001092621
obscnb / obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF b / OBSCN* / Q5VST9* / obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF*ENSDARG000000221010
myot / myotilinENSDARG000000763120


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032984  Hemicentin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030198 extracellular matrix organization IGI
 biological_processGO:0035122 embryonic medial fin morphogenesis IGI
 biological_processGO:0043589 skin morphogenesis IGI
 biological_processGO:0090497 mesenchymal cell migration IGI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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