ENSDARG00000077388


Danio rerio

Features
Gene ID: ENSDARG00000077388
  
Biological name :obsl1b
  
Synonyms : obscurin-like 1b / obsl1b
  
Possible biological names infered from orthology : D3YYU8 / O75147 / obscurin like 1 / Obscurin-like protein 1 / OBSL1
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 41744865
Gene end: 41784805
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120503
Ensembl peptide - ENSDARP00000101944
Ensembl peptide - ENSDARP00000154286
NCBI entrez gene - 606585     See in Manteia.
swissprot - A0A0A0MPU2
swissprot - F1QX95
ZFIN ID - ZDB-GENE-050809-29
Ensembl - ENSDARG00000077388
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OBSL1ENSGALG00000011242Gallus gallus
 OBSL1ENSG00000124006Homo sapiens
 Obsl1ENSMUSG00000026211Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
obsl1a / obscurin-like 1a / OBSL1* / O75147* / obscurin like 1*ENSDARG0000000368436
ttn.1 / titin, tandem duplicate 1 / TTN* / titin* / A2ASS6* / Q8WZ42*ENSDARG0000000056313
hmcn1 / hemicentin 1 / D3YXG0* / Q96RW7*ENSDARG0000001693612
ttn.2 / titin, tandem duplicate 2 / TTN* / titin* / A2ASS6* / Q8WZ42*ENSDARG0000002821312
obscnb / obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF b / OBSCN* / Q5VST9* / obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF*ENSDARG0000002210111
hmcn2 / hemicentin 2 / A2AJ76* / Q8NDA2*ENSDARG000000793278
si:ch211-159i8.4ENSDARG000000763325
igsf10 / immunoglobulin superfamily, member 10 / Q3V1M1* / Q6WRI0*ENSDARG000000774975
mxra5b / matrix-remodelling associated 5b / MXRA5* / Q9NR99* / matrix remodeling associated 5*ENSDARG000000763095
mxra5a / matrix-remodelling associated 5a / MXRA5* / Q9NR99* / matrix remodeling associated 5*ENSDARG000000748155
hmcn2 / hemicentin 2ENSDARG000000860603
CU928131.1ENSDARG000001092622
palld / palladin, cytoskeletal associated protein / Q8WX93* / Q9ET54* / Palladin *ENSDARG000000400092
myot / myotilinENSDARG000000763120


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006941 striated muscle contraction IBA
 biological_processGO:0007015 actin filament organization IBA
 biological_processGO:0045214 sarcomere organization IBA
 biological_processGO:0071688 striated muscle myosin thick filament assembly IBA
 cellular_componentGO:0005859 muscle myosin complex IBA
 cellular_componentGO:0030018 Z disc IBA
 cellular_componentGO:0031430 M band IBA
 molecular_functionGO:0008307 structural constituent of muscle IBA
 molecular_functionGO:0051015 actin filament binding IBA
 molecular_functionGO:0051371 muscle alpha-actinin binding IBA
 molecular_functionGO:0097493 structural molecule activity conferring elasticity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr