ENSDARG00000040009


Danio rerio

Features
Gene ID: ENSDARG00000040009
  
Biological name :palld
  
Synonyms : palladin, cytoskeletal associated protein / palld
  
Possible biological names infered from orthology : Palladin / Q8WX93 / Q9ET54
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 23498255
Gene end: 23649028
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000125235
Ensembl peptide - ENSDARP00000121539
Ensembl peptide - ENSDARP00000124534
Ensembl peptide - ENSDARP00000058531
Ensembl peptide - ENSDARP00000143758
NCBI entrez gene - 557660     See in Manteia.
RefSeq - XM_021468621
RefSeq - XM_021468620
swissprot - F1R7G1
swissprot - A0A286Y9B4
swissprot - F8W315
swissprot - H0WEF8
swissprot - Q5RHD8
ZFIN ID - ZDB-GENE-041014-252
Ensembl - ENSDARG00000040009
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PALLDENSGALG00000009650Gallus gallus
 PALLDENSG00000129116Homo sapiens
 PalldENSMUSG00000058056Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ttn.1 / titin, tandem duplicate 1 / TTN* / titin* / A2ASS6* / Q8WZ42*ENSDARG0000000056323
ttn.2 / titin, tandem duplicate 2 / TTN* / titin* / A2ASS6* / Q8WZ42*ENSDARG0000002821323
myot / myotilinENSDARG0000007631214
hmcn1 / hemicentin 1 / D3YXG0* / Q96RW7*ENSDARG0000001693614
hmcn2 / hemicentin 2 / A2AJ76* / Q8NDA2*ENSDARG0000007932712
mxra5a / matrix-remodelling associated 5a / MXRA5* / Q9NR99* / matrix remodeling associated 5*ENSDARG0000007481511
igsf10 / immunoglobulin superfamily, member 10 / Q3V1M1* / Q6WRI0*ENSDARG0000007749710
mxra5b / matrix-remodelling associated 5b / MXRA5* / Q9NR99* / matrix remodeling associated 5*ENSDARG0000007630910
si:ch211-159i8.4ENSDARG000000763329
CU928131.1ENSDARG000001092627
obsl1b / obscurin-like 1b / OBSL1* / D3YYU8* / O75147* / obscurin like 1* / Obscurin-like protein 1 *ENSDARG000000773884
obsl1a / obscurin-like 1a / OBSL1* / O75147* / obscurin like 1*ENSDARG000000036844
obscnb / obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF b / OBSCN* / Q5VST9* / obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF*ENSDARG000000221014
hmcn2 / hemicentin 2ENSDARG000000860600


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030334 regulation of cell migration IBA
 biological_processGO:0048739 cardiac muscle fiber development IBA
 biological_processGO:0051493 regulation of cytoskeleton organization IBA
 cellular_componentGO:0030018 Z disc IBA
 molecular_functionGO:0051015 actin filament binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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