ENSDARG00000091029


Danio rerio

Features
Gene ID: ENSDARG00000091029
  
Biological name :phox2bb
  
Synonyms : paired-like homeobox 2bb / phox2bb
  
Possible biological names infered from orthology : O35690 / paired like homeobox 2b / Paired mesoderm homeobox protein 2B / PHOX2B / Q99453
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 17064126
Gene end: 17072736
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097111
Ensembl peptide - ENSDARP00000130156
Ensembl peptide - ENSDARP00000137086
NCBI entrez gene - 544654     See in Manteia.
RefSeq - NM_001014818
RefSeq Peptide - NP_001014818
swissprot - F6NUL8
swissprot - A0A0J9YJE3
swissprot - Q5I7G4
ZFIN ID - ZDB-GENE-050407-3
Ensembl - ENSDARG00000091029
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHOX2BENSGALG00000014250Gallus gallus
 PHOX2BENSG00000109132Homo sapiens
 O35690ENSMUSG00000012520Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
phox2a / paired-like homeobox 2a / O14813* / Q62066* / Paired mesoderm homeobox protein 2A *ENSDARG0000000740652
phox2ba / paired-like homeobox 2baENSDARG0000007533028
arxa / O42115 / aristaless related homeobox a / ARX* / Q96QS3* / O35085* / Homeobox protein ARX * / aristaless related homeobox*ENSDARG0000005801127
drgx / dorsal root ganglia homeobox / A6NNA5* / Prrxl1* / Q8BYH0* / paired related homeobox protein-like 1*ENSDARG0000006932925
alx4b / ALX homeobox 4b / ALX4* / O35137* / Q9H161* / ALX homeobox 4* / Homeobox protein aristaless-like 4 *ENSDARG0000007444225
alx4a / ALX homeobox 4a / ALX4* / O35137* / Q9H161* / ALX homeobox 4* / Homeobox protein aristaless-like 4 *ENSDARG0000008833225
alx1 / Q1LVQ7 / ALX homeobox 1 / Q15699* / Q8C8B0* / ALX homeobox protein 1 *ENSDARG0000006282424
rx1 / retinal homeobox gene 1 / RAX2* / Q96IS3* / retina and anterior neural fold homeobox 2*ENSDARG0000007168423
arxb / aristaless related homeobox b / ARX* / Q96QS3* / aristaless related homeobox*ENSDARG0000010152323
vsx2 / visual system homeobox 2ENSDARG0000000557422
uncx / UNC homeobox / A6NJT0* / O08934*ENSDARG0000010297622
rx2 / retinal homeobox gene 2 / RAX2* / Q96IS3* / retina and anterior neural fold homeobox 2*ENSDARG0000004032122
rx3 / retinal homeobox gene 3 / RAX* / Q9Y2V3* / O35602* / Retinal homeobox protein Rx * / retina and anterior neural fold homeobox*ENSDARG0000005289321
uncx4.1 / Unc4.1 homeobox (C. elegans) / UNCX* / A6NJT0* / O08934* / UNC homeobox*ENSDARG0000003776021
vsx1 / visual system homeobox 1 homolog, chx10-like / Q91V10* / Q9NZR4* / visual system homeobox 1*ENSDARG0000005629221
si:dkey-43p13.5ENSDARG0000010419918


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0048484 enteric nervous system development IMP
 biological_processGO:0061549 sympathetic ganglion development IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001155 enteric nervous system enteric nervous system neuron decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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