ENSDARG00000093572


Danio rerio

Features
Gene ID: ENSDARG00000093572
  
Biological name :lamc3
  
Synonyms : lamc3 / laminin, gamma 3
  
Possible biological names infered from orthology : laminin subunit gamma 3 / Q9R0B6 / Q9Y6N6
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 34407763
Gene end: 34542480
  
Corresponding Affymetrix probe sets: Dr.16449.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117247
Ensembl peptide - ENSDARP00000149333
NCBI entrez gene - 558958     See in Manteia.
swissprot - F1QPJ1
ZFIN ID - ZDB-GENE-060531-121
Ensembl - ENSDARG00000093572
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LAMC3ENSG00000050555Homo sapiens
 Lamc3ENSMUSG00000026840Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lamc1 / Q1LVF0 / laminin, gamma 1 / P11047* / laminin subunit gamma 1*ENSDARG0000003627939
lama5 / laminin, alpha 5 / O15230* / Q61001* / laminin subunit alpha 5*ENSDARG0000005854325
lama1 / laminin, alpha 1 / P25391* / laminin subunit alpha 1*ENSDARG0000010227720
lamb2l / laminin, beta 2-likeENSDARG0000003395018
lamb1b / laminin, beta 1b / LAMB1* / P02469* / P07942* / laminin subunit beta 1*ENSDARG0000004552417
lamb1a / laminin, beta 1a / LAMB1* / P02469* / P07942* / laminin subunit beta 1*ENSDARG0000010120917
lamb2 / laminin, beta 2 (laminin S) / P55268* / Q61292* / laminin subunit beta 2*ENSDARG0000000208417
lamb4 / laminin, beta 4 / A4D0S4* / laminin subunit beta 4*ENSDARG0000003913316
lama2 / laminin, alpha 2 / P24043* / laminin subunit alpha 2*ENSDARG000000993909
lama4 / laminin, alpha 4 / P97927* / Q16363* / laminin subunit alpha 4*ENSDARG000000207858
lama3 / laminin, alpha 3 / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSDARG000000714628
ntn4 / netrin 4 / Q9HB63* / Q9JI33*ENSDARG000001020668
CABZ01065423.1 / LAMA2* / P24043* / laminin subunit alpha 2*ENSDARG000001120197
si:dkey-202e22.2ENSDARG000000612607
si:ch211-241e1.3 / LAMA3* / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSDARG000000226157
lamc2 / laminin, gamma 2 / Q13753* / laminin subunit gamma 2*ENSDARG000000682886
CABZ01092781.1 / LAMB3* / Q13751* / laminin subunit beta 3*ENSDARG000001100401


Protein motifs (from Interpro)
Interpro ID Name
 IPR000034  Laminin IV
 IPR000742  EGF-like domain
 IPR002049  Laminin EGF domain
 IPR008211  Laminin, N-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR013032  EGF-like, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Laminin interactions
MET activates PTK2 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000002084 lamb2 / laminin, beta 2 (laminin S) / P55268* / Q61292* / laminin subunit beta 2*  / complex






 

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