ENSDARG00000102066


Danio rerio

Features
Gene ID: ENSDARG00000102066
  
Biological name :ntn4
  
Synonyms : netrin 4 / ntn4
  
Possible biological names infered from orthology : Q9HB63 / Q9JI33
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 19334314
Gene end: 19369002
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132076
Ensembl peptide - ENSDARP00000142987
NCBI entrez gene - 561440     See in Manteia.
swissprot - A0A0R4IFE9
swissprot - A0A1D5NT15
ZFIN ID - ZDB-GENE-050310-1
Ensembl - ENSDARG00000102066
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NTN4ENSGALG00000011406Gallus gallus
 NTN4ENSG00000074527Homo sapiens
 Ntn4ENSMUSG00000020019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-202e22.2ENSDARG0000006126042
lamb2l / laminin, beta 2-likeENSDARG0000003395029
lamb1a / laminin, beta 1a / LAMB1* / P02469* / P07942* / laminin subunit beta 1*ENSDARG0000010120929
lamb1b / laminin, beta 1b / LAMB1* / P02469* / P07942* / laminin subunit beta 1*ENSDARG0000004552429
lamb2 / laminin, beta 2 (laminin S) / P55268* / Q61292* / laminin subunit beta 2*ENSDARG0000000208429
lamb4 / laminin, beta 4 / A4D0S4* / laminin subunit beta 4*ENSDARG0000003913328
lama5 / laminin, alpha 5 / O15230* / Q61001* / laminin subunit alpha 5*ENSDARG0000005854323
lama1 / laminin, alpha 1 / P25391* / laminin subunit alpha 1*ENSDARG0000010227722
lamc3 / laminin, gamma 3 / Q9R0B6* / Q9Y6N6* / laminin subunit gamma 3*ENSDARG0000009357221
lamc1 / Q1LVF0 / laminin, gamma 1 / P11047* / laminin subunit gamma 1*ENSDARG0000003627920
CABZ01065423.1 / LAMA2* / P24043* / laminin subunit alpha 2*ENSDARG0000011201916
lama4 / laminin, alpha 4 / P97927* / Q16363* / laminin subunit alpha 4*ENSDARG000000207859
lama3 / laminin, alpha 3 / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSDARG000000714626
si:ch211-241e1.3 / LAMA3* / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSDARG000000226156
lamc2 / laminin, gamma 2 / Q13753* / laminin subunit gamma 2*ENSDARG000000682885
lama2 / laminin, alpha 2 / P24043* / laminin subunit alpha 2*ENSDARG000000993904
CABZ01092781.1 / LAMB3* / Q13751* / laminin subunit beta 3*ENSDARG000001100401


Protein motifs (from Interpro)
Interpro ID Name
 IPR001134  Netrin domain
 IPR002049  Laminin EGF domain
 IPR008211  Laminin, N-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR008993  Tissue inhibitor of metalloproteinases-like, OB-fold
 IPR018933  Netrin module, non-TIMP type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048514 blood vessel morphogenesis IMP
 cellular_componentGO:0005576 extracellular region IEA


Pathways (from Reactome)
Pathway description
Netrin-1 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000014 dorsal aorta dorsal aorta broken , abnormal
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 ZFA:0000477 posterior cardinal vein posterior cardinal vein broken , abnormal
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 ZFA:0001267 cranial vasculature cranial vasculature physical object quality , abnormal
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 ZFA:0001285 intersegmental vessel intersegmental vessel decreased length , abnormal
intersegmental vessel decreased thickness , abnormal
intersegmental vessel decreased amount , abnormal
Show

 ZFA:0005004 aortic arch aortic arch physical object quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000099034 unc5a / unc-5 netrin receptor A / Q6ZN44* / Q8K1S4*  / reaction / complex






 

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