ENSDARG00000099039


Danio rerio

Features
Gene ID: ENSDARG00000099039
  
Biological name :pcbp2
  
Synonyms : pcbp2 / poly(rC) binding protein 2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 250724
Gene end: 264173
  
Corresponding Affymetrix probe sets: Dr.4783.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000130014
Ensembl peptide - ENSDARP00000134105
NCBI entrez gene - 321844     See in Manteia.
swissprot - A0A0R4IAP2
swissprot - Q7ZVK5
ZFIN ID - ZDB-GENE-030131-563
Ensembl - ENSDARG00000099039
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcbp3 / poly(rC) binding protein 3 / P57721* / P57722* / Mus musculus poly(rC) binding protein 3 (Pcbp3), transcript variant 2, mRNA.*ENSDARG0000005437878
pcbp4 / poly(rC) binding protein 4 / P57723*ENSDARG0000002427666
zgc:110045ENSDARG0000005714148
hnrnpk / heterogeneous nuclear ribonucleoprotein K / P61978* / P61979* / Heteroous nuclear ribonucleoprotein K *ENSDARG0000001891431
hnrpkl / heterogeneous nuclear ribonucleoprotein K, like / P61979* / HNRNPK* / P61978* / Heteroous nuclear ribonucleoprotein K * / heterogeneous nuclear ribonucleoprotein K*ENSDARG0000000703431
nova1 / neuro-oncological ventral antigen 1 / NOVA2* / Q9UNW9* / NOVA alternative splicing regulator 2*ENSDARG0000002017829
nova2 / neuro-oncological ventral antigen 2 / Q9UNW9* / NOVA alternative splicing regulator 2*ENSDARG0000001767329
zgc:110045 / PCBP2* / PCBP1* / Q15365* / Q15366* / poly(rC) binding protein 1* / poly(rC) binding protein 2*ENSDARG0000011096123


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr